Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 MIR658-201ENST00000385210 100 ntBASIC10.79□□□□□ -0.68
NACAE9PAV3 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC10.79□□□□□ -0.68
NACAE9PAV3 B9D1-203ENST00000395615 805 ntTSL 3 BASIC10.79□□□□□ -0.68
NACAE9PAV3 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
NACAE9PAV3 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC10.79□□□□□ -0.68
NACAE9PAV3 AC011495.1-201ENST00000498085 584 ntBASIC10.79□□□□□ -0.68
NACAE9PAV3 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC10.79□□□□□ -0.68
NACAE9PAV3 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
NACAE9PAV3 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
NACAE9PAV3 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC10.79□□□□□ -0.68
NACAE9PAV3 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC10.79□□□□□ -0.68
NACAE9PAV3 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC10.79□□□□□ -0.68
NACAE9PAV3 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
NACAE9PAV3 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
NACAE9PAV3 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC10.79□□□□□ -0.68
NACAE9PAV3 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
NACAE9PAV3 HSPA7-201ENST00000445535 1927 ntBASIC10.79□□□□□ -0.68
NACAE9PAV3 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
NACAE9PAV3 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
NACAE9PAV3 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
NACAE9PAV3 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC10.79□□□□□ -0.68
NACAE9PAV3 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
NACAE9PAV3 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC10.79□□□□□ -0.68
NACAE9PAV3 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
NACAE9PAV3 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
NACAE9PAV3 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
NACAE9PAV3 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC10.79□□□□□ -0.68
NACAE9PAV3 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
NACAE9PAV3 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC10.79□□□□□ -0.68
NACAE9PAV3 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
NACAE9PAV3 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
NACAE9PAV3 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
NACAE9PAV3 HNRNPA1P48-201ENST00000562726 1377 ntBASIC10.79□□□□□ -0.68
NACAE9PAV3 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
NACAE9PAV3 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
NACAE9PAV3 AL354702.1-201ENST00000442006 1960 ntBASIC10.79□□□□□ -0.68
NACAE9PAV3 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC10.79□□□□□ -0.68
NACAE9PAV3 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC10.79□□□□□ -0.68
NACAE9PAV3 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC10.78□□□□□ -0.68
NACAE9PAV3 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
NACAE9PAV3 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC10.78□□□□□ -0.68
NACAE9PAV3 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
NACAE9PAV3 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC10.78□□□□□ -0.68
NACAE9PAV3 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
NACAE9PAV3 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
NACAE9PAV3 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC10.78□□□□□ -0.68
NACAE9PAV3 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC10.78□□□□□ -0.68
NACAE9PAV3 RN7SL752P-201ENST00000463779 287 ntBASIC10.78□□□□□ -0.68
NACAE9PAV3 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC10.78□□□□□ -0.68
NACAE9PAV3 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC10.78□□□□□ -0.68
NACAE9PAV3 MIR5189-201ENST00000577370 114 ntBASIC10.78□□□□□ -0.68
NACAE9PAV3 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC10.78□□□□□ -0.68
NACAE9PAV3 PIGL-212ENST00000581006 554 ntTSL 4 BASIC10.78□□□□□ -0.68
NACAE9PAV3 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC10.78□□□□□ -0.68
NACAE9PAV3 CU634019.7-201ENST00000624153 1185 ntBASIC10.78□□□□□ -0.68
NACAE9PAV3 FP236241.2-201ENST00000624906 1185 ntBASIC10.78□□□□□ -0.68
NACAE9PAV3 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
NACAE9PAV3 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
NACAE9PAV3 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC10.78□□□□□ -0.68
NACAE9PAV3 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
NACAE9PAV3 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
NACAE9PAV3 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
NACAE9PAV3 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
NACAE9PAV3 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
NACAE9PAV3 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
NACAE9PAV3 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
NACAE9PAV3 XYLT2-201ENST00000017003 3507 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
NACAE9PAV3 AL805961.2-201ENST00000642139 4817 ntBASIC10.78□□□□□ -0.68
NACAE9PAV3 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
NACAE9PAV3 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
NACAE9PAV3 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC10.78□□□□□ -0.68
NACAE9PAV3 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
NACAE9PAV3 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
NACAE9PAV3 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
NACAE9PAV3 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
NACAE9PAV3 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
NACAE9PAV3 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
NACAE9PAV3 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
NACAE9PAV3 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
NACAE9PAV3 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
NACAE9PAV3 TP73-213ENST00000604479 1623 ntTSL 5 BASIC10.78□□□□□ -0.68
NACAE9PAV3 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
NACAE9PAV3 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
NACAE9PAV3 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
NACAE9PAV3 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
NACAE9PAV3 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
NACAE9PAV3 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
NACAE9PAV3 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
NACAE9PAV3 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
NACAE9PAV3 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
NACAE9PAV3 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
NACAE9PAV3 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
NACAE9PAV3 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
NACAE9PAV3 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
NACAE9PAV3 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
NACAE9PAV3 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
NACAE9PAV3 AL139094.1-201ENST00000405549 1188 ntBASIC10.78□□□□□ -0.68
NACAE9PAV3 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC10.78□□□□□ -0.68
NACAE9PAV3 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC10.78□□□□□ -0.68
NACAE9PAV3 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC10.78□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms