Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 MPV17-204ENST00000399052 749 ntTSL 4 BASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 PARVG-202ENST00000415224 999 ntTSL 2 BASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 ISCA2P1-201ENST00000425548 448 ntBASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 AC012441.2-201ENST00000444843 739 ntBASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 FTLP1-201ENST00000449155 526 ntBASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 RPS2P36-201ENST00000456516 831 ntBASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 RCC2P8-201ENST00000502779 1035 ntBASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 AC009779.1-201ENST00000551138 283 ntBASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 CENPX-208ENST00000584347 799 ntTSL 2 BASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 AC020922.3-201ENST00000595064 547 ntBASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 SPCS2P2-201ENST00000603270 608 ntBASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 AL353726.2-201ENST00000623259 884 ntBASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 MVK-214ENST00000629016 1591 ntTSL 5 BASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 HSPA7-201ENST00000445535 1927 ntBASIC16.51■□□□□ 0.23
HDAC6Q9UBN7 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 AC010327.5-201ENST00000586923 3061 ntBASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 AC006335.1-201ENST00000445200 547 ntBASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 SCARNA21-201ENST00000517026 139 ntBASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 AC005962.1-201ENST00000584100 773 ntBASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 AL353770.1-201ENST00000614915 403 ntBASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 Z98259.2-201ENST00000641583 609 ntBASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 FAM90A7P-201ENST00000382628 1395 ntBASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 FAM90A23P-201ENST00000400136 1395 ntBASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HDAC6Q9UBN7 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HDAC6Q9UBN7 AC023090.2-201ENST00000625182 2110 ntBASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms