Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DNAAF1Q8NEP3 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 AMT-232ENST00000636199 1546 ntTSL 5 BASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 REXO1L1P-201ENST00000379010 6598 ntBASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 NUTM2HP-201ENST00000442076 2498 ntBASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 OSM-203ENST00000403463 464 ntTSL 3 BASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 AL442647.2-201ENST00000429864 857 ntBASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 AC114812.1-204ENST00000449669 728 ntBASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 MYADML-201ENST00000474610 2147 ntBASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
DNAAF1Q8NEP3 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.92□□□□□ -0.34
DNAAF1Q8NEP3 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.92□□□□□ -0.34
DNAAF1Q8NEP3 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
DNAAF1Q8NEP3 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
DNAAF1Q8NEP3 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.92□□□□□ -0.34
DNAAF1Q8NEP3 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
DNAAF1Q8NEP3 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
DNAAF1Q8NEP3 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
DNAAF1Q8NEP3 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC12.92□□□□□ -0.34
DNAAF1Q8NEP3 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
DNAAF1Q8NEP3 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
DNAAF1Q8NEP3 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
DNAAF1Q8NEP3 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC12.92□□□□□ -0.34
DNAAF1Q8NEP3 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
DNAAF1Q8NEP3 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
DNAAF1Q8NEP3 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
DNAAF1Q8NEP3 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
DNAAF1Q8NEP3 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.92□□□□□ -0.34
DNAAF1Q8NEP3 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
DNAAF1Q8NEP3 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
DNAAF1Q8NEP3 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.92□□□□□ -0.34
DNAAF1Q8NEP3 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.92□□□□□ -0.34
DNAAF1Q8NEP3 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
DNAAF1Q8NEP3 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
DNAAF1Q8NEP3 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
DNAAF1Q8NEP3 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.92□□□□□ -0.34
DNAAF1Q8NEP3 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC12.92□□□□□ -0.34
DNAAF1Q8NEP3 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.92□□□□□ -0.34
DNAAF1Q8NEP3 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12.92□□□□□ -0.34
DNAAF1Q8NEP3 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC12.92□□□□□ -0.34
DNAAF1Q8NEP3 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC12.92□□□□□ -0.34
DNAAF1Q8NEP3 RNA5SP421-201ENST00000516864 134 ntBASIC12.92□□□□□ -0.34
DNAAF1Q8NEP3 FADS2-205ENST00000517839 469 ntTSL 3 BASIC12.92□□□□□ -0.34
DNAAF1Q8NEP3 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC12.92□□□□□ -0.34
DNAAF1Q8NEP3 AC022616.1-201ENST00000518688 554 ntBASIC12.92□□□□□ -0.34
DNAAF1Q8NEP3 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC12.92□□□□□ -0.34
DNAAF1Q8NEP3 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
DNAAF1Q8NEP3 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
DNAAF1Q8NEP3 DUT-210ENST00000559935 569 ntTSL 3 BASIC12.92□□□□□ -0.34
DNAAF1Q8NEP3 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC12.92□□□□□ -0.34
DNAAF1Q8NEP3 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC12.92□□□□□ -0.34
DNAAF1Q8NEP3 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.92□□□□□ -0.34
DNAAF1Q8NEP3 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
DNAAF1Q8NEP3 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.92□□□□□ -0.34
DNAAF1Q8NEP3 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
DNAAF1Q8NEP3 AC004790.1-201ENST00000612686 536 ntBASIC12.92□□□□□ -0.34
DNAAF1Q8NEP3 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC12.92□□□□□ -0.34
DNAAF1Q8NEP3 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms