Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDKAL1Q5VV42 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CDKAL1Q5VV42 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDKAL1Q5VV42 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDKAL1Q5VV42 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDKAL1Q5VV42 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDKAL1Q5VV42 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC15.9■□□□□ 0.14
CDKAL1Q5VV42 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC15.9■□□□□ 0.14
CDKAL1Q5VV42 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDKAL1Q5VV42 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDKAL1Q5VV42 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
CDKAL1Q5VV42 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CDKAL1Q5VV42 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDKAL1Q5VV42 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDKAL1Q5VV42 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDKAL1Q5VV42 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC15.9■□□□□ 0.14
CDKAL1Q5VV42 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDKAL1Q5VV42 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
CDKAL1Q5VV42 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.9■□□□□ 0.14
CDKAL1Q5VV42 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.9■□□□□ 0.14
CDKAL1Q5VV42 CICP20-201ENST00000443330 2801 ntBASIC15.9■□□□□ 0.14
CDKAL1Q5VV42 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDKAL1Q5VV42 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDKAL1Q5VV42 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDKAL1Q5VV42 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
CDKAL1Q5VV42 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDKAL1Q5VV42 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC15.89■□□□□ 0.13
CDKAL1Q5VV42 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CDKAL1Q5VV42 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.89■□□□□ 0.13
CDKAL1Q5VV42 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CDKAL1Q5VV42 NUTM2HP-201ENST00000442076 2498 ntBASIC15.89■□□□□ 0.13
CDKAL1Q5VV42 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CDKAL1Q5VV42 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDKAL1Q5VV42 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDKAL1Q5VV42 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDKAL1Q5VV42 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDKAL1Q5VV42 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
CDKAL1Q5VV42 AP006294.1-201ENST00000415407 339 ntBASIC15.89■□□□□ 0.13
CDKAL1Q5VV42 CNN2P8-201ENST00000421872 913 ntBASIC15.89■□□□□ 0.13
CDKAL1Q5VV42 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.89■□□□□ 0.13
CDKAL1Q5VV42 CHMP1AP1-201ENST00000445563 662 ntBASIC15.89■□□□□ 0.13
CDKAL1Q5VV42 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.89■□□□□ 0.13
CDKAL1Q5VV42 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDKAL1Q5VV42 SLC25A47P1-201ENST00000531577 414 ntBASIC15.89■□□□□ 0.13
CDKAL1Q5VV42 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDKAL1Q5VV42 AC078819.1-201ENST00000547454 765 ntBASIC15.89■□□□□ 0.13
CDKAL1Q5VV42 AC012085.1-201ENST00000548270 765 ntBASIC15.89■□□□□ 0.13
CDKAL1Q5VV42 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDKAL1Q5VV42 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC15.89■□□□□ 0.13
CDKAL1Q5VV42 MIR4745-201ENST00000577608 62 ntBASIC15.89■□□□□ 0.13
CDKAL1Q5VV42 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.89■□□□□ 0.13
CDKAL1Q5VV42 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.89■□□□□ 0.13
CDKAL1Q5VV42 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDKAL1Q5VV42 USP39-207ENST00000450066 2086 ntTSL 2 BASIC15.89■□□□□ 0.13
CDKAL1Q5VV42 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDKAL1Q5VV42 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC15.89■□□□□ 0.13
CDKAL1Q5VV42 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDKAL1Q5VV42 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CDKAL1Q5VV42 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
CDKAL1Q5VV42 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDKAL1Q5VV42 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDKAL1Q5VV42 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CDKAL1Q5VV42 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDKAL1Q5VV42 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC15.89■□□□□ 0.13
CDKAL1Q5VV42 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDKAL1Q5VV42 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.89■□□□□ 0.13
CDKAL1Q5VV42 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDKAL1Q5VV42 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDKAL1Q5VV42 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC15.89■□□□□ 0.13
CDKAL1Q5VV42 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CDKAL1Q5VV42 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDKAL1Q5VV42 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDKAL1Q5VV42 PDIA3P1-201ENST00000471856 1510 ntBASIC15.89■□□□□ 0.13
CDKAL1Q5VV42 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDKAL1Q5VV42 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC15.88■□□□□ 0.13
CDKAL1Q5VV42 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC15.88■□□□□ 0.13
CDKAL1Q5VV42 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CDKAL1Q5VV42 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CDKAL1Q5VV42 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDKAL1Q5VV42 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.88■□□□□ 0.13
CDKAL1Q5VV42 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC15.88■□□□□ 0.13
CDKAL1Q5VV42 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDKAL1Q5VV42 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDKAL1Q5VV42 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC15.88■□□□□ 0.13
CDKAL1Q5VV42 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDKAL1Q5VV42 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDKAL1Q5VV42 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDKAL1Q5VV42 C2orf27AP3-201ENST00000434123 579 ntBASIC15.88■□□□□ 0.13
CDKAL1Q5VV42 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.88■□□□□ 0.13
CDKAL1Q5VV42 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC15.88■□□□□ 0.13
CDKAL1Q5VV42 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.88■□□□□ 0.13
CDKAL1Q5VV42 C2orf69P2-201ENST00000562032 1123 ntBASIC15.88■□□□□ 0.13
CDKAL1Q5VV42 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.88■□□□□ 0.13
CDKAL1Q5VV42 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC15.88■□□□□ 0.13
CDKAL1Q5VV42 AC244669.2-201ENST00000612320 853 ntBASIC15.88■□□□□ 0.13
CDKAL1Q5VV42 AL354718.3-201ENST00000616414 581 ntBASIC15.88■□□□□ 0.13
CDKAL1Q5VV42 CR382287.1-201ENST00000623954 586 ntBASIC15.88■□□□□ 0.13
CDKAL1Q5VV42 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDKAL1Q5VV42 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.88■□□□□ 0.13
CDKAL1Q5VV42 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms