Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RFPL1O75677 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.68□□□□□ -0.06
RFPL1O75677 AL355864.2-201ENST00000447420 863 ntBASIC14.68□□□□□ -0.06
RFPL1O75677 BCRP2-202ENST00000447763 634 ntBASIC14.68□□□□□ -0.06
RFPL1O75677 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.68□□□□□ -0.06
RFPL1O75677 BCRP6-201ENST00000510112 632 ntBASIC14.68□□□□□ -0.06
RFPL1O75677 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.68□□□□□ -0.06
RFPL1O75677 BCRP7-201ENST00000511549 544 ntBASIC14.68□□□□□ -0.06
RFPL1O75677 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
RFPL1O75677 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.68□□□□□ -0.06
RFPL1O75677 AC068587.3-201ENST00000526613 355 ntBASIC14.68□□□□□ -0.06
RFPL1O75677 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.68□□□□□ -0.06
RFPL1O75677 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.68□□□□□ -0.06
RFPL1O75677 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RFPL1O75677 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFPL1O75677 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
RFPL1O75677 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RFPL1O75677 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC14.68□□□□□ -0.06
RFPL1O75677 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.68□□□□□ -0.06
RFPL1O75677 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.68□□□□□ -0.06
RFPL1O75677 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFPL1O75677 AC015909.5-201ENST00000624336 2266 ntBASIC14.68□□□□□ -0.06
RFPL1O75677 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RFPL1O75677 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RFPL1O75677 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RFPL1O75677 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
RFPL1O75677 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.68□□□□□ -0.06
RFPL1O75677 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.68□□□□□ -0.06
RFPL1O75677 AL590440.2-201ENST00000641973 1595 ntBASIC14.68□□□□□ -0.06
RFPL1O75677 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFPL1O75677 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFPL1O75677 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
RFPL1O75677 AC072061.1-201ENST00000569710 2234 ntBASIC14.68□□□□□ -0.06
RFPL1O75677 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.68□□□□□ -0.06
RFPL1O75677 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFPL1O75677 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFPL1O75677 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RFPL1O75677 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
RFPL1O75677 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.67□□□□□ -0.06
RFPL1O75677 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.67□□□□□ -0.06
RFPL1O75677 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RFPL1O75677 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RFPL1O75677 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFPL1O75677 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFPL1O75677 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.67□□□□□ -0.06
RFPL1O75677 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
RFPL1O75677 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFPL1O75677 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFPL1O75677 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
RFPL1O75677 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFPL1O75677 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RFPL1O75677 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFPL1O75677 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.67□□□□□ -0.06
RFPL1O75677 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFPL1O75677 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFPL1O75677 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
RFPL1O75677 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFPL1O75677 AC005229.1-201ENST00000392885 409 ntBASIC14.67□□□□□ -0.06
RFPL1O75677 AC099336.1-201ENST00000417053 1171 ntBASIC14.67□□□□□ -0.06
RFPL1O75677 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFPL1O75677 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.67□□□□□ -0.06
RFPL1O75677 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.67□□□□□ -0.06
RFPL1O75677 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
RFPL1O75677 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.67□□□□□ -0.06
RFPL1O75677 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFPL1O75677 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.67□□□□□ -0.06
RFPL1O75677 RNA5SP412-201ENST00000516234 123 ntBASIC14.67□□□□□ -0.06
RFPL1O75677 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.67□□□□□ -0.06
RFPL1O75677 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.67□□□□□ -0.06
RFPL1O75677 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.67□□□□□ -0.06
RFPL1O75677 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RFPL1O75677 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
RFPL1O75677 MIR6787-201ENST00000616675 61 ntBASIC14.67□□□□□ -0.06
RFPL1O75677 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.67□□□□□ -0.06
RFPL1O75677 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RFPL1O75677 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.67□□□□□ -0.06
RFPL1O75677 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.67□□□□□ -0.06
RFPL1O75677 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFPL1O75677 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFPL1O75677 CICP20-201ENST00000443330 2801 ntBASIC14.67□□□□□ -0.06
RFPL1O75677 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFPL1O75677 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RFPL1O75677 AC027612.1-201ENST00000445234 2395 ntBASIC14.67□□□□□ -0.06
RFPL1O75677 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFPL1O75677 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
RFPL1O75677 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.66□□□□□ -0.06
RFPL1O75677 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RFPL1O75677 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFPL1O75677 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
RFPL1O75677 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RFPL1O75677 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFPL1O75677 AL359183.1-201ENST00000623796 2132 ntBASIC14.66□□□□□ -0.06
RFPL1O75677 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
RFPL1O75677 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.66□□□□□ -0.06
RFPL1O75677 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
RFPL1O75677 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFPL1O75677 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.66□□□□□ -0.06
RFPL1O75677 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFPL1O75677 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFPL1O75677 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms