Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTNND1O60716 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.93■□□□□ 0.3
CTNND1O60716 AC091951.1-201ENST00000512854 2465 ntBASIC16.93■□□□□ 0.3
CTNND1O60716 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.93■□□□□ 0.3
CTNND1O60716 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CTNND1O60716 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTNND1O60716 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC16.93■□□□□ 0.3
CTNND1O60716 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC16.93■□□□□ 0.3
CTNND1O60716 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.93■□□□□ 0.3
CTNND1O60716 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
CTNND1O60716 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.93■□□□□ 0.3
CTNND1O60716 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CTNND1O60716 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC16.93■□□□□ 0.3
CTNND1O60716 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC16.93■□□□□ 0.3
CTNND1O60716 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTNND1O60716 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CTNND1O60716 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTNND1O60716 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CTNND1O60716 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CTNND1O60716 GUSBP10-201ENST00000417412 665 ntBASIC16.93■□□□□ 0.3
CTNND1O60716 AC097065.1-201ENST00000425737 517 ntBASIC16.93■□□□□ 0.3
CTNND1O60716 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC16.93■□□□□ 0.3
CTNND1O60716 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC16.93■□□□□ 0.3
CTNND1O60716 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CTNND1O60716 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC16.93■□□□□ 0.3
CTNND1O60716 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC16.93■□□□□ 0.3
CTNND1O60716 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC16.93■□□□□ 0.3
CTNND1O60716 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.93■□□□□ 0.3
CTNND1O60716 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.93■□□□□ 0.3
CTNND1O60716 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTNND1O60716 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTNND1O60716 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CTNND1O60716 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.93■□□□□ 0.3
CTNND1O60716 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CTNND1O60716 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.93■□□□□ 0.3
CTNND1O60716 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.93■□□□□ 0.3
CTNND1O60716 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTNND1O60716 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTNND1O60716 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTNND1O60716 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CTNND1O60716 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTNND1O60716 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTNND1O60716 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTNND1O60716 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.93■□□□□ 0.3
CTNND1O60716 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.93■□□□□ 0.3
CTNND1O60716 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.93■□□□□ 0.3
CTNND1O60716 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC16.93■□□□□ 0.3
CTNND1O60716 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTNND1O60716 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CTNND1O60716 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTNND1O60716 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTNND1O60716 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTNND1O60716 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTNND1O60716 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CTNND1O60716 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTNND1O60716 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTNND1O60716 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTNND1O60716 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTNND1O60716 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
CTNND1O60716 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTNND1O60716 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTNND1O60716 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC16.92■□□□□ 0.3
CTNND1O60716 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC16.92■□□□□ 0.3
CTNND1O60716 OR8T1P-201ENST00000421347 918 ntBASIC16.92■□□□□ 0.3
CTNND1O60716 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC16.92■□□□□ 0.3
CTNND1O60716 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC16.92■□□□□ 0.3
CTNND1O60716 CD164-210ENST00000512821 964 ntTSL 2 BASIC16.92■□□□□ 0.3
CTNND1O60716 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC16.92■□□□□ 0.3
CTNND1O60716 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC16.92■□□□□ 0.3
CTNND1O60716 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC16.92■□□□□ 0.3
CTNND1O60716 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC16.92■□□□□ 0.3
CTNND1O60716 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC16.92■□□□□ 0.3
CTNND1O60716 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTNND1O60716 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CTNND1O60716 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
CTNND1O60716 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTNND1O60716 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTNND1O60716 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTNND1O60716 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CTNND1O60716 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
CTNND1O60716 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
CTNND1O60716 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CTNND1O60716 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTNND1O60716 AC067930.6-201ENST00000623257 4947 ntBASIC16.92■□□□□ 0.3
CTNND1O60716 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.91■□□□□ 0.3
CTNND1O60716 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTNND1O60716 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTNND1O60716 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CTNND1O60716 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CTNND1O60716 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTNND1O60716 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.91■□□□□ 0.3
CTNND1O60716 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC16.91■□□□□ 0.3
CTNND1O60716 BRD7P5-201ENST00000299197 1822 ntBASIC16.91■□□□□ 0.3
CTNND1O60716 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTNND1O60716 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTNND1O60716 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC16.91■□□□□ 0.3
CTNND1O60716 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTNND1O60716 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CTNND1O60716 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTNND1O60716 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms