Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC66A2RUB6 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC66A2RUB6 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC66A2RUB6 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC66A2RUB6 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC15.95■□□□□ 0.14
CCDC66A2RUB6 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC66A2RUB6 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC66A2RUB6 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC66A2RUB6 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
CCDC66A2RUB6 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
CCDC66A2RUB6 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CCDC66A2RUB6 AC093525.8-201ENST00000624099 1342 ntBASIC15.94■□□□□ 0.14
CCDC66A2RUB6 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC15.94■□□□□ 0.14
CCDC66A2RUB6 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CCDC66A2RUB6 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC66A2RUB6 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.94■□□□□ 0.14
CCDC66A2RUB6 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.94■□□□□ 0.14
CCDC66A2RUB6 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC66A2RUB6 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC66A2RUB6 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC66A2RUB6 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC66A2RUB6 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC66A2RUB6 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC66A2RUB6 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC15.94■□□□□ 0.14
CCDC66A2RUB6 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC66A2RUB6 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC66A2RUB6 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC66A2RUB6 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC66A2RUB6 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
CCDC66A2RUB6 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.94■□□□□ 0.14
CCDC66A2RUB6 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.94■□□□□ 0.14
CCDC66A2RUB6 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.94■□□□□ 0.14
CCDC66A2RUB6 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC66A2RUB6 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.94■□□□□ 0.14
CCDC66A2RUB6 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.94■□□□□ 0.14
CCDC66A2RUB6 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.94■□□□□ 0.14
CCDC66A2RUB6 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.94■□□□□ 0.14
CCDC66A2RUB6 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.94■□□□□ 0.14
CCDC66A2RUB6 AL391069.4-201ENST00000609583 481 ntBASIC15.94■□□□□ 0.14
CCDC66A2RUB6 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.94■□□□□ 0.14
CCDC66A2RUB6 AL590560.3-201ENST00000623350 461 ntBASIC15.94■□□□□ 0.14
CCDC66A2RUB6 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC66A2RUB6 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC66A2RUB6 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC66A2RUB6 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC66A2RUB6 NPTN-IT1-201ENST00000628401 2283 ntBASIC15.94■□□□□ 0.14
CCDC66A2RUB6 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC66A2RUB6 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC15.94■□□□□ 0.14
CCDC66A2RUB6 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC66A2RUB6 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC66A2RUB6 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
CCDC66A2RUB6 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC66A2RUB6 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC15.94■□□□□ 0.14
CCDC66A2RUB6 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.94■□□□□ 0.14
CCDC66A2RUB6 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC66A2RUB6 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC66A2RUB6 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC15.93■□□□□ 0.14
CCDC66A2RUB6 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.93■□□□□ 0.14
CCDC66A2RUB6 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC66A2RUB6 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CCDC66A2RUB6 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC15.93■□□□□ 0.14
CCDC66A2RUB6 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CCDC66A2RUB6 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC66A2RUB6 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CCDC66A2RUB6 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC66A2RUB6 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CCDC66A2RUB6 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC66A2RUB6 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.93■□□□□ 0.14
CCDC66A2RUB6 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC66A2RUB6 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.93■□□□□ 0.14
CCDC66A2RUB6 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC66A2RUB6 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC66A2RUB6 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC66A2RUB6 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CCDC66A2RUB6 AC018665.1-201ENST00000622927 1362 ntBASIC15.93■□□□□ 0.14
CCDC66A2RUB6 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC66A2RUB6 AL645937.2-201ENST00000396808 931 ntBASIC15.93■□□□□ 0.14
CCDC66A2RUB6 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.93■□□□□ 0.14
CCDC66A2RUB6 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CCDC66A2RUB6 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.93■□□□□ 0.14
CCDC66A2RUB6 TPT1P11-201ENST00000458482 498 ntBASIC15.93■□□□□ 0.14
CCDC66A2RUB6 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.93■□□□□ 0.14
CCDC66A2RUB6 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.93■□□□□ 0.14
CCDC66A2RUB6 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC66A2RUB6 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC66A2RUB6 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC66A2RUB6 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC15.93■□□□□ 0.14
CCDC66A2RUB6 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC66A2RUB6 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC15.93■□□□□ 0.14
CCDC66A2RUB6 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC66A2RUB6 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC66A2RUB6 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC66A2RUB6 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.93■□□□□ 0.14
CCDC66A2RUB6 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC66A2RUB6 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC66A2RUB6 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
CCDC66A2RUB6 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC66A2RUB6 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.93■□□□□ 0.14
CCDC66A2RUB6 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.93■□□□□ 0.14
CCDC66A2RUB6 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms