Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LOC102724428A0A0B4J2F2 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC18.19■□□□□ 0.5
LOC102724428A0A0B4J2F2 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
LOC102724428A0A0B4J2F2 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LOC102724428A0A0B4J2F2 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
LOC102724428A0A0B4J2F2 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
LOC102724428A0A0B4J2F2 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LOC102724428A0A0B4J2F2 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LOC102724428A0A0B4J2F2 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LOC102724428A0A0B4J2F2 AL354702.1-201ENST00000442006 1960 ntBASIC18.19■□□□□ 0.5
LOC102724428A0A0B4J2F2 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC18.19■□□□□ 0.5
LOC102724428A0A0B4J2F2 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC18.19■□□□□ 0.5
LOC102724428A0A0B4J2F2 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LOC102724428A0A0B4J2F2 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LOC102724428A0A0B4J2F2 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
LOC102724428A0A0B4J2F2 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LOC102724428A0A0B4J2F2 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LOC102724428A0A0B4J2F2 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC18.19■□□□□ 0.5
LOC102724428A0A0B4J2F2 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LOC102724428A0A0B4J2F2 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
LOC102724428A0A0B4J2F2 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC18.19■□□□□ 0.5
LOC102724428A0A0B4J2F2 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
LOC102724428A0A0B4J2F2 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC18.19■□□□□ 0.5
LOC102724428A0A0B4J2F2 SLC25A15P3-201ENST00000505530 290 ntBASIC18.19■□□□□ 0.5
LOC102724428A0A0B4J2F2 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC18.19■□□□□ 0.5
LOC102724428A0A0B4J2F2 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC18.19■□□□□ 0.5
LOC102724428A0A0B4J2F2 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
LOC102724428A0A0B4J2F2 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC18.19■□□□□ 0.5
LOC102724428A0A0B4J2F2 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC18.19■□□□□ 0.5
LOC102724428A0A0B4J2F2 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LOC102724428A0A0B4J2F2 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
LOC102724428A0A0B4J2F2 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC18.19■□□□□ 0.5
LOC102724428A0A0B4J2F2 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LOC102724428A0A0B4J2F2 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
LOC102724428A0A0B4J2F2 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LOC102724428A0A0B4J2F2 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LOC102724428A0A0B4J2F2 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC18.19■□□□□ 0.5
LOC102724428A0A0B4J2F2 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LOC102724428A0A0B4J2F2 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LOC102724428A0A0B4J2F2 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.19■□□□□ 0.5
LOC102724428A0A0B4J2F2 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
LOC102724428A0A0B4J2F2 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LOC102724428A0A0B4J2F2 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.18■□□□□ 0.5
LOC102724428A0A0B4J2F2 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LOC102724428A0A0B4J2F2 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC18.18■□□□□ 0.5
LOC102724428A0A0B4J2F2 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC18.18■□□□□ 0.5
LOC102724428A0A0B4J2F2 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LOC102724428A0A0B4J2F2 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.18■□□□□ 0.5
LOC102724428A0A0B4J2F2 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LOC102724428A0A0B4J2F2 AL357373.1-201ENST00000394974 322 ntBASIC18.18■□□□□ 0.5
LOC102724428A0A0B4J2F2 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LOC102724428A0A0B4J2F2 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC18.18■□□□□ 0.5
LOC102724428A0A0B4J2F2 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC18.18■□□□□ 0.5
LOC102724428A0A0B4J2F2 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
LOC102724428A0A0B4J2F2 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LOC102724428A0A0B4J2F2 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC18.18■□□□□ 0.5
LOC102724428A0A0B4J2F2 AL627230.2-201ENST00000613254 655 ntBASIC18.18■□□□□ 0.5
LOC102724428A0A0B4J2F2 AP000769.1-203ENST00000637245 208 ntBASIC18.18■□□□□ 0.5
LOC102724428A0A0B4J2F2 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
LOC102724428A0A0B4J2F2 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
LOC102724428A0A0B4J2F2 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
LOC102724428A0A0B4J2F2 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
LOC102724428A0A0B4J2F2 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
LOC102724428A0A0B4J2F2 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
LOC102724428A0A0B4J2F2 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
LOC102724428A0A0B4J2F2 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
LOC102724428A0A0B4J2F2 AC004554.1-201ENST00000422830 1468 ntBASIC18.18■□□□□ 0.5
LOC102724428A0A0B4J2F2 AL365181.1-201ENST00000564032 1828 ntBASIC18.18■□□□□ 0.5
LOC102724428A0A0B4J2F2 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LOC102724428A0A0B4J2F2 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LOC102724428A0A0B4J2F2 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
LOC102724428A0A0B4J2F2 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC18.18■□□□□ 0.5
LOC102724428A0A0B4J2F2 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LOC102724428A0A0B4J2F2 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LOC102724428A0A0B4J2F2 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.18■□□□□ 0.5
LOC102724428A0A0B4J2F2 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC18.17■□□□□ 0.5
LOC102724428A0A0B4J2F2 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
LOC102724428A0A0B4J2F2 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
LOC102724428A0A0B4J2F2 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.17■□□□□ 0.5
LOC102724428A0A0B4J2F2 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
LOC102724428A0A0B4J2F2 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LOC102724428A0A0B4J2F2 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
LOC102724428A0A0B4J2F2 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LOC102724428A0A0B4J2F2 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LOC102724428A0A0B4J2F2 PSAT1P2-201ENST00000426107 972 ntBASIC18.17■□□□□ 0.5
LOC102724428A0A0B4J2F2 AL929302.1-201ENST00000426556 871 ntBASIC18.17■□□□□ 0.5
LOC102724428A0A0B4J2F2 ASS1P2-201ENST00000439895 1223 ntBASIC18.17■□□□□ 0.5
LOC102724428A0A0B4J2F2 GALP-202ENST00000440823 889 ntTSL 5 BASIC18.17■□□□□ 0.5
LOC102724428A0A0B4J2F2 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LOC102724428A0A0B4J2F2 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LOC102724428A0A0B4J2F2 BATF-202ENST00000555504 361 ntTSL 2 BASIC18.17■□□□□ 0.5
LOC102724428A0A0B4J2F2 DLK1-205ENST00000556051 469 ntTSL 2 BASIC18.17■□□□□ 0.5
LOC102724428A0A0B4J2F2 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC18.17■□□□□ 0.5
LOC102724428A0A0B4J2F2 MIR5001-201ENST00000580185 100 ntBASIC18.17■□□□□ 0.5
LOC102724428A0A0B4J2F2 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
LOC102724428A0A0B4J2F2 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC18.17■□□□□ 0.5
LOC102724428A0A0B4J2F2 MME-218ENST00000625667 363 ntTSL 5 BASIC18.17■□□□□ 0.5
LOC102724428A0A0B4J2F2 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC18.17■□□□□ 0.5
LOC102724428A0A0B4J2F2 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC18.17■□□□□ 0.5
LOC102724428A0A0B4J2F2 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms