Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PHF8Q9UPP1 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PHF8Q9UPP1 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PHF8Q9UPP1 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PHF8Q9UPP1 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PHF8Q9UPP1 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC19.47■□□□□ 0.71
PHF8Q9UPP1 AL929302.1-201ENST00000426556 871 ntBASIC19.47■□□□□ 0.71
PHF8Q9UPP1 MTND4LP12-201ENST00000448237 295 ntBASIC19.47■□□□□ 0.71
PHF8Q9UPP1 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PHF8Q9UPP1 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC19.47■□□□□ 0.71
PHF8Q9UPP1 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC19.47■□□□□ 0.71
PHF8Q9UPP1 SLC25A15P3-201ENST00000505530 290 ntBASIC19.47■□□□□ 0.71
PHF8Q9UPP1 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC19.47■□□□□ 0.71
PHF8Q9UPP1 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PHF8Q9UPP1 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC19.47■□□□□ 0.71
PHF8Q9UPP1 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PHF8Q9UPP1 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PHF8Q9UPP1 CFTRP2-201ENST00000634304 199 ntBASIC19.47■□□□□ 0.71
PHF8Q9UPP1 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
PHF8Q9UPP1 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC19.47■□□□□ 0.71
PHF8Q9UPP1 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PHF8Q9UPP1 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PHF8Q9UPP1 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC19.47■□□□□ 0.71
PHF8Q9UPP1 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
PHF8Q9UPP1 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PHF8Q9UPP1 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PHF8Q9UPP1 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PHF8Q9UPP1 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC19.47■□□□□ 0.71
PHF8Q9UPP1 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PHF8Q9UPP1 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PHF8Q9UPP1 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC19.46■□□□□ 0.71
PHF8Q9UPP1 AL365181.1-201ENST00000564032 1828 ntBASIC19.46■□□□□ 0.71
PHF8Q9UPP1 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC19.46■□□□□ 0.71
PHF8Q9UPP1 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC19.46■□□□□ 0.71
PHF8Q9UPP1 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PHF8Q9UPP1 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PHF8Q9UPP1 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PHF8Q9UPP1 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PHF8Q9UPP1 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
PHF8Q9UPP1 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PHF8Q9UPP1 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PHF8Q9UPP1 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PHF8Q9UPP1 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC19.46■□□□□ 0.71
PHF8Q9UPP1 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
PHF8Q9UPP1 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PHF8Q9UPP1 HNRNPA1P58-201ENST00000403629 610 ntBASIC19.46■□□□□ 0.71
PHF8Q9UPP1 ASS1P2-201ENST00000439895 1223 ntBASIC19.46■□□□□ 0.71
PHF8Q9UPP1 AL451000.1-201ENST00000451300 1186 ntBASIC19.46■□□□□ 0.71
PHF8Q9UPP1 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC19.46■□□□□ 0.71
PHF8Q9UPP1 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC19.46■□□□□ 0.71
PHF8Q9UPP1 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC19.46■□□□□ 0.71
PHF8Q9UPP1 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PHF8Q9UPP1 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PHF8Q9UPP1 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC19.46■□□□□ 0.71
PHF8Q9UPP1 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PHF8Q9UPP1 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PHF8Q9UPP1 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PHF8Q9UPP1 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.7
PHF8Q9UPP1 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC19.45■□□□□ 0.7
PHF8Q9UPP1 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC19.45■□□□□ 0.7
PHF8Q9UPP1 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.45■□□□□ 0.7
PHF8Q9UPP1 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC19.45■□□□□ 0.7
PHF8Q9UPP1 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.45■□□□□ 0.7
PHF8Q9UPP1 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC19.45■□□□□ 0.7
PHF8Q9UPP1 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PHF8Q9UPP1 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC19.45■□□□□ 0.7
PHF8Q9UPP1 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PHF8Q9UPP1 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PHF8Q9UPP1 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
PHF8Q9UPP1 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PHF8Q9UPP1 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC19.45■□□□□ 0.7
PHF8Q9UPP1 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC19.45■□□□□ 0.7
PHF8Q9UPP1 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PHF8Q9UPP1 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PHF8Q9UPP1 KRT18P4-201ENST00000422599 1288 ntBASIC19.45■□□□□ 0.7
PHF8Q9UPP1 PSAT1P2-201ENST00000426107 972 ntBASIC19.45■□□□□ 0.7
PHF8Q9UPP1 GALP-202ENST00000440823 889 ntTSL 5 BASIC19.45■□□□□ 0.7
PHF8Q9UPP1 CASP3-205ENST00000517513 964 ntTSL 5 BASIC19.45■□□□□ 0.7
PHF8Q9UPP1 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC19.45■□□□□ 0.7
PHF8Q9UPP1 BATF-202ENST00000555504 361 ntTSL 2 BASIC19.45■□□□□ 0.7
PHF8Q9UPP1 DLK1-205ENST00000556051 469 ntTSL 2 BASIC19.45■□□□□ 0.7
PHF8Q9UPP1 CES1P2-201ENST00000566467 1242 ntBASIC19.45■□□□□ 0.7
PHF8Q9UPP1 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC19.45■□□□□ 0.7
PHF8Q9UPP1 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC19.45■□□□□ 0.7
PHF8Q9UPP1 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC19.45■□□□□ 0.7
PHF8Q9UPP1 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC19.45■□□□□ 0.7
PHF8Q9UPP1 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PHF8Q9UPP1 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC19.45■□□□□ 0.7
PHF8Q9UPP1 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PHF8Q9UPP1 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PHF8Q9UPP1 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC19.45■□□□□ 0.7
PHF8Q9UPP1 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
PHF8Q9UPP1 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PHF8Q9UPP1 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PHF8Q9UPP1 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PHF8Q9UPP1 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PHF8Q9UPP1 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PHF8Q9UPP1 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PHF8Q9UPP1 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC19.45■□□□□ 0.7
PHF8Q9UPP1 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms