Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 DDX11L8-201ENST00000535849 366 ntBASIC21.98■■□□□ 1.11
RIMBP3Q9UFD9 SMIM6-202ENST00000579469 957 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RIMBP3Q9UFD9 AC018766.1-201ENST00000601211 484 ntTSL 3 BASIC21.98■■□□□ 1.11
RIMBP3Q9UFD9 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RIMBP3Q9UFD9 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RIMBP3Q9UFD9 MROH4P-201ENST00000431302 1578 ntBASIC21.98■■□□□ 1.11
RIMBP3Q9UFD9 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC21.98■■□□□ 1.11
RIMBP3Q9UFD9 CDK7-201ENST00000256443 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RIMBP3Q9UFD9 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
RIMBP3Q9UFD9 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RIMBP3Q9UFD9 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RIMBP3Q9UFD9 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC21.98■■□□□ 1.11
RIMBP3Q9UFD9 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RIMBP3Q9UFD9 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
RIMBP3Q9UFD9 APOC2-201ENST00000252490 727 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
RIMBP3Q9UFD9 MESTP4-201ENST00000412333 1204 ntBASIC21.98■■□□□ 1.11
RIMBP3Q9UFD9 TULP3P1-202ENST00000453253 1291 ntBASIC21.98■■□□□ 1.11
RIMBP3Q9UFD9 AC012100.1-201ENST00000470304 282 ntBASIC21.98■■□□□ 1.11
RIMBP3Q9UFD9 CYP4F10P-201ENST00000589560 752 ntBASIC21.98■■□□□ 1.11
RIMBP3Q9UFD9 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RIMBP3Q9UFD9 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
RIMBP3Q9UFD9 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RIMBP3Q9UFD9 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
RIMBP3Q9UFD9 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
RIMBP3Q9UFD9 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RIMBP3Q9UFD9 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RIMBP3Q9UFD9 CICP23-201ENST00000605013 2741 ntBASIC21.98■■□□□ 1.11
RIMBP3Q9UFD9 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RIMBP3Q9UFD9 ANP32B-201ENST00000339399 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RIMBP3Q9UFD9 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC21.97■■□□□ 1.11
RIMBP3Q9UFD9 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
RIMBP3Q9UFD9 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC21.97■■□□□ 1.11
RIMBP3Q9UFD9 ADCK1-201ENST00000238561 2234 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RIMBP3Q9UFD9 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC21.97■■□□□ 1.11
RIMBP3Q9UFD9 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RIMBP3Q9UFD9 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC21.97■■□□□ 1.11
RIMBP3Q9UFD9 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RIMBP3Q9UFD9 SEM1-201ENST00000248566 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RIMBP3Q9UFD9 FOLR1-203ENST00000393679 1331 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RIMBP3Q9UFD9 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
RIMBP3Q9UFD9 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC21.97■■□□□ 1.11
RIMBP3Q9UFD9 MRPL45P2-201ENST00000425159 927 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RIMBP3Q9UFD9 AC253536.1-201ENST00000437021 315 ntBASIC21.97■■□□□ 1.11
RIMBP3Q9UFD9 PDLIM2-212ENST00000443561 701 ntTSL 2 BASIC21.97■■□□□ 1.11
RIMBP3Q9UFD9 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC21.97■■□□□ 1.11
RIMBP3Q9UFD9 RN7SL111P-201ENST00000468841 285 ntBASIC21.97■■□□□ 1.11
RIMBP3Q9UFD9 AC007992.1-201ENST00000513953 953 ntBASIC21.97■■□□□ 1.11
RIMBP3Q9UFD9 AKR1B1P3-201ENST00000525311 588 ntBASIC21.97■■□□□ 1.11
RIMBP3Q9UFD9 DHRS7-202ENST00000536410 1194 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RIMBP3Q9UFD9 AC104506.1-201ENST00000609247 429 ntBASIC21.97■■□□□ 1.11
RIMBP3Q9UFD9 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC21.97■■□□□ 1.11
RIMBP3Q9UFD9 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RIMBP3Q9UFD9 TUBB8-207ENST00000568866 1367 ntTSL 5 BASIC21.96■■□□□ 1.11
RIMBP3Q9UFD9 USP8-219ENST00000625664 1568 ntTSL 5 BASIC21.96■■□□□ 1.11
RIMBP3Q9UFD9 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RIMBP3Q9UFD9 CD9-212ENST00000610354 1315 ntTSL 5 BASIC21.96■■□□□ 1.11
RIMBP3Q9UFD9 PTAFR-201ENST00000305392 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RIMBP3Q9UFD9 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
RIMBP3Q9UFD9 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RIMBP3Q9UFD9 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RIMBP3Q9UFD9 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RIMBP3Q9UFD9 AL512444.1-201ENST00000419644 480 ntTSL 2 BASIC21.96■■□□□ 1.11
RIMBP3Q9UFD9 FHIT-205ENST00000476844 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RIMBP3Q9UFD9 AC011389.2-201ENST00000514811 365 ntTSL 2 BASIC21.96■■□□□ 1.11
RIMBP3Q9UFD9 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
RIMBP3Q9UFD9 AC010547.1-202ENST00000567341 230 ntTSL 2 BASIC21.96■■□□□ 1.11
RIMBP3Q9UFD9 RPL26-206ENST00000582556 763 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
RIMBP3Q9UFD9 MRPL34-206ENST00000602206 603 ntTSL 3 BASIC21.96■■□□□ 1.11
RIMBP3Q9UFD9 AL603832.3-203ENST00000606505 813 ntAPPRIS P5 TSL 5 BASIC21.96■■□□□ 1.11
RIMBP3Q9UFD9 AC092535.4-201ENST00000609548 397 ntBASIC21.96■■□□□ 1.11
RIMBP3Q9UFD9 AL161937.2-201ENST00000615503 403 ntTSL 2 BASIC21.96■■□□□ 1.11
RIMBP3Q9UFD9 TNNI2-206ENST00000617947 699 ntAPPRIS ALT1 TSL 5 BASIC21.96■■□□□ 1.11
RIMBP3Q9UFD9 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC21.96■■□□□ 1.11
RIMBP3Q9UFD9 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
RIMBP3Q9UFD9 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RIMBP3Q9UFD9 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC21.96■■□□□ 1.11
RIMBP3Q9UFD9 PSMB8-201ENST00000374881 1351 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RIMBP3Q9UFD9 AC005519.2-201ENST00000554532 1367 ntTSL 4 BASIC21.96■■□□□ 1.11
RIMBP3Q9UFD9 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RIMBP3Q9UFD9 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RIMBP3Q9UFD9 AGGF1P2-201ENST00000426656 2106 ntBASIC21.96■■□□□ 1.11
RIMBP3Q9UFD9 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RIMBP3Q9UFD9 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
RIMBP3Q9UFD9 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RIMBP3Q9UFD9 AC024909.3-201ENST00000611513 2257 ntBASIC21.96■■□□□ 1.11
RIMBP3Q9UFD9 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
RIMBP3Q9UFD9 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
RIMBP3Q9UFD9 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
RIMBP3Q9UFD9 OR52L1-201ENST00000332249 1094 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
RIMBP3Q9UFD9 WFDC2-202ENST00000339946 420 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RIMBP3Q9UFD9 WFDC2-204ENST00000372676 614 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RIMBP3Q9UFD9 CST11-202ENST00000377009 554 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RIMBP3Q9UFD9 AC004884.1-201ENST00000393647 319 ntBASIC21.95■■□□□ 1.1
RIMBP3Q9UFD9 AQP7-207ENST00000447660 998 ntTSL 2 BASIC21.95■■□□□ 1.1
RIMBP3Q9UFD9 SVILP1-203ENST00000450581 486 ntTSL 3 BASIC21.95■■□□□ 1.1
RIMBP3Q9UFD9 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC21.95■■□□□ 1.1
RIMBP3Q9UFD9 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC21.95■■□□□ 1.1
RIMBP3Q9UFD9 AC005154.1-202ENST00000578293 999 ntTSL 5 BASIC21.95■■□□□ 1.1
RIMBP3Q9UFD9 AC244102.2-201ENST00000597568 955 ntBASIC21.95■■□□□ 1.1
RIMBP3Q9UFD9 AC091736.1-201ENST00000609370 305 ntBASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms