Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 AP002353.1-201ENST00000528257 1599 ntBASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 ST13P19-201ENST00000442505 1124 ntBASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 DUX4L50-201ENST00000455245 715 ntBASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 MIR4522-201ENST00000584932 87 ntBASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 AC138894.2-201ENST00000602838 371 ntBASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 AC092171.5-201ENST00000608012 942 ntBASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 AL022334.2-201ENST00000610000 484 ntBASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 MIR6727-201ENST00000620702 65 ntBASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 AC051619.9-201ENST00000623237 597 ntBASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CCDC85AQ96PX6 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CCDC85AQ96PX6 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CCDC85AQ96PX6 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CCDC85AQ96PX6 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC85AQ96PX6 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC85AQ96PX6 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC85AQ96PX6 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC85AQ96PX6 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC85AQ96PX6 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC18.04■□□□□ 0.48
CCDC85AQ96PX6 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC85AQ96PX6 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC85AQ96PX6 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CCDC85AQ96PX6 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC85AQ96PX6 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CCDC85AQ96PX6 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC85AQ96PX6 AC078991.1-201ENST00000437297 610 ntBASIC18.04■□□□□ 0.48
CCDC85AQ96PX6 RPSAP15-201ENST00000448168 861 ntBASIC18.04■□□□□ 0.48
CCDC85AQ96PX6 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
CCDC85AQ96PX6 PARP8-206ENST00000503665 572 ntTSL 4 BASIC18.04■□□□□ 0.48
CCDC85AQ96PX6 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC85AQ96PX6 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC85AQ96PX6 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC18.04■□□□□ 0.48
CCDC85AQ96PX6 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC85AQ96PX6 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC85AQ96PX6 AC007326.1-201ENST00000604539 458 ntBASIC18.04■□□□□ 0.48
CCDC85AQ96PX6 AC087045.2-201ENST00000606279 1003 ntBASIC18.04■□□□□ 0.48
CCDC85AQ96PX6 AC103810.10-201ENST00000606504 343 ntBASIC18.04■□□□□ 0.48
CCDC85AQ96PX6 MIR6842-201ENST00000612539 65 ntBASIC18.04■□□□□ 0.48
CCDC85AQ96PX6 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CCDC85AQ96PX6 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC85AQ96PX6 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC85AQ96PX6 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC85AQ96PX6 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC85AQ96PX6 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC85AQ96PX6 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CCDC85AQ96PX6 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
CCDC85AQ96PX6 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC85AQ96PX6 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
CCDC85AQ96PX6 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC85AQ96PX6 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CCDC85AQ96PX6 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC85AQ96PX6 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC85AQ96PX6 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC85AQ96PX6 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC18.03■□□□□ 0.48
CCDC85AQ96PX6 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC85AQ96PX6 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC85AQ96PX6 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC85AQ96PX6 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC85AQ96PX6 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC85AQ96PX6 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC85AQ96PX6 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC85AQ96PX6 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
CCDC85AQ96PX6 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC18.03■□□□□ 0.48
CCDC85AQ96PX6 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC85AQ96PX6 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC85AQ96PX6 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms