Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHAMP1Q96JM3 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CHAMP1Q96JM3 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHAMP1Q96JM3 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHAMP1Q96JM3 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHAMP1Q96JM3 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHAMP1Q96JM3 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CHAMP1Q96JM3 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CHAMP1Q96JM3 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHAMP1Q96JM3 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.96■□□□□ 0.31
CHAMP1Q96JM3 AL442647.2-201ENST00000429864 857 ntBASIC16.96■□□□□ 0.31
CHAMP1Q96JM3 AC093433.1-201ENST00000458048 571 ntBASIC16.96■□□□□ 0.31
CHAMP1Q96JM3 ELK1P1-201ENST00000485699 580 ntBASIC16.96■□□□□ 0.31
CHAMP1Q96JM3 AC055876.2-201ENST00000531834 546 ntBASIC16.96■□□□□ 0.31
CHAMP1Q96JM3 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.96■□□□□ 0.31
CHAMP1Q96JM3 SORD2P-201ENST00000558556 1069 ntBASIC16.96■□□□□ 0.31
CHAMP1Q96JM3 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.96■□□□□ 0.31
CHAMP1Q96JM3 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.96■□□□□ 0.31
CHAMP1Q96JM3 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.96■□□□□ 0.31
CHAMP1Q96JM3 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHAMP1Q96JM3 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHAMP1Q96JM3 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CHAMP1Q96JM3 AL590440.2-201ENST00000641973 1595 ntBASIC16.96■□□□□ 0.31
CHAMP1Q96JM3 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHAMP1Q96JM3 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHAMP1Q96JM3 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC16.96■□□□□ 0.31
CHAMP1Q96JM3 NCLP1-201ENST00000445357 1963 ntBASIC16.96■□□□□ 0.31
CHAMP1Q96JM3 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHAMP1Q96JM3 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC16.96■□□□□ 0.31
CHAMP1Q96JM3 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHAMP1Q96JM3 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHAMP1Q96JM3 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHAMP1Q96JM3 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHAMP1Q96JM3 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC16.96■□□□□ 0.31
CHAMP1Q96JM3 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
CHAMP1Q96JM3 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
CHAMP1Q96JM3 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CHAMP1Q96JM3 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
CHAMP1Q96JM3 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC16.96■□□□□ 0.3
CHAMP1Q96JM3 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CHAMP1Q96JM3 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
CHAMP1Q96JM3 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CHAMP1Q96JM3 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CHAMP1Q96JM3 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CHAMP1Q96JM3 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC16.95■□□□□ 0.3
CHAMP1Q96JM3 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CHAMP1Q96JM3 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC16.95■□□□□ 0.3
CHAMP1Q96JM3 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHAMP1Q96JM3 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CHAMP1Q96JM3 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CHAMP1Q96JM3 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHAMP1Q96JM3 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC16.95■□□□□ 0.3
CHAMP1Q96JM3 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CHAMP1Q96JM3 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CHAMP1Q96JM3 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHAMP1Q96JM3 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC16.95■□□□□ 0.3
CHAMP1Q96JM3 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CHAMP1Q96JM3 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC16.95■□□□□ 0.3
CHAMP1Q96JM3 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHAMP1Q96JM3 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.95■□□□□ 0.3
CHAMP1Q96JM3 SOCS2P1-201ENST00000417727 557 ntBASIC16.95■□□□□ 0.3
CHAMP1Q96JM3 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.95■□□□□ 0.3
CHAMP1Q96JM3 RRP7BP-205ENST00000566851 833 ntBASIC16.95■□□□□ 0.3
CHAMP1Q96JM3 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.95■□□□□ 0.3
CHAMP1Q96JM3 AC093726.1-201ENST00000608064 963 ntBASIC16.95■□□□□ 0.3
CHAMP1Q96JM3 RPSAP52-203ENST00000622976 1023 ntBASIC16.95■□□□□ 0.3
CHAMP1Q96JM3 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHAMP1Q96JM3 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHAMP1Q96JM3 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CHAMP1Q96JM3 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHAMP1Q96JM3 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHAMP1Q96JM3 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHAMP1Q96JM3 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHAMP1Q96JM3 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.95■□□□□ 0.3
CHAMP1Q96JM3 KRT8P35-201ENST00000483942 1338 ntBASIC16.95■□□□□ 0.3
CHAMP1Q96JM3 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHAMP1Q96JM3 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
CHAMP1Q96JM3 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHAMP1Q96JM3 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC16.94■□□□□ 0.3
CHAMP1Q96JM3 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHAMP1Q96JM3 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CHAMP1Q96JM3 AC125807.2-201ENST00000513358 3514 ntBASIC16.94■□□□□ 0.3
CHAMP1Q96JM3 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHAMP1Q96JM3 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.94■□□□□ 0.3
CHAMP1Q96JM3 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CHAMP1Q96JM3 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC16.94■□□□□ 0.3
CHAMP1Q96JM3 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
CHAMP1Q96JM3 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHAMP1Q96JM3 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC16.94■□□□□ 0.3
CHAMP1Q96JM3 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHAMP1Q96JM3 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHAMP1Q96JM3 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHAMP1Q96JM3 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.94■□□□□ 0.3
CHAMP1Q96JM3 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.94■□□□□ 0.3
CHAMP1Q96JM3 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHAMP1Q96JM3 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.94■□□□□ 0.3
CHAMP1Q96JM3 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.94■□□□□ 0.3
CHAMP1Q96JM3 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.94■□□□□ 0.3
CHAMP1Q96JM3 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CHAMP1Q96JM3 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms