Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.36■□□□□ 0.37
SNED1Q8TER0 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNED1Q8TER0 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SNED1Q8TER0 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC17.36■□□□□ 0.37
SNED1Q8TER0 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SNED1Q8TER0 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNED1Q8TER0 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNED1Q8TER0 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNED1Q8TER0 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
SNED1Q8TER0 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
SNED1Q8TER0 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC17.36■□□□□ 0.37
SNED1Q8TER0 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNED1Q8TER0 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNED1Q8TER0 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC17.36■□□□□ 0.37
SNED1Q8TER0 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC17.36■□□□□ 0.37
SNED1Q8TER0 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC17.36■□□□□ 0.37
SNED1Q8TER0 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC17.36■□□□□ 0.37
SNED1Q8TER0 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNED1Q8TER0 ALG1L7P-201ENST00000502317 768 ntBASIC17.36■□□□□ 0.37
SNED1Q8TER0 EEF1GP8-201ENST00000506566 1154 ntBASIC17.36■□□□□ 0.37
SNED1Q8TER0 AC087203.1-201ENST00000532111 1181 ntBASIC17.36■□□□□ 0.37
SNED1Q8TER0 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC17.36■□□□□ 0.37
SNED1Q8TER0 MIR5001-201ENST00000580185 100 ntBASIC17.36■□□□□ 0.37
SNED1Q8TER0 COQ4-204ENST00000608951 781 ntTSL 2 BASIC17.36■□□□□ 0.37
SNED1Q8TER0 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNED1Q8TER0 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC17.36■□□□□ 0.37
SNED1Q8TER0 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNED1Q8TER0 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SNED1Q8TER0 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC17.36■□□□□ 0.37
SNED1Q8TER0 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC17.36■□□□□ 0.37
SNED1Q8TER0 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNED1Q8TER0 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC17.36■□□□□ 0.37
SNED1Q8TER0 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNED1Q8TER0 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNED1Q8TER0 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNED1Q8TER0 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SNED1Q8TER0 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
SNED1Q8TER0 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SNED1Q8TER0 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC17.35■□□□□ 0.37
SNED1Q8TER0 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.35■□□□□ 0.37
SNED1Q8TER0 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNED1Q8TER0 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SNED1Q8TER0 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC17.35■□□□□ 0.37
SNED1Q8TER0 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SNED1Q8TER0 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNED1Q8TER0 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SNED1Q8TER0 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SNED1Q8TER0 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SNED1Q8TER0 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNED1Q8TER0 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SNED1Q8TER0 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SNED1Q8TER0 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNED1Q8TER0 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SNED1Q8TER0 AC073210.1-201ENST00000414799 232 ntBASIC17.35■□□□□ 0.37
SNED1Q8TER0 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC17.35■□□□□ 0.37
SNED1Q8TER0 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC17.35■□□□□ 0.37
SNED1Q8TER0 RN7SL375P-201ENST00000492442 298 ntBASIC17.35■□□□□ 0.37
SNED1Q8TER0 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC17.35■□□□□ 0.37
SNED1Q8TER0 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC17.35■□□□□ 0.37
SNED1Q8TER0 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC17.35■□□□□ 0.37
SNED1Q8TER0 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC17.35■□□□□ 0.37
SNED1Q8TER0 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNED1Q8TER0 AC068831.5-201ENST00000557387 328 ntBASIC17.35■□□□□ 0.37
SNED1Q8TER0 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC17.35■□□□□ 0.37
SNED1Q8TER0 RARS-210ENST00000626454 177 ntTSL 5 BASIC17.35■□□□□ 0.37
SNED1Q8TER0 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SNED1Q8TER0 AC046158.3-201ENST00000624947 2558 ntBASIC17.35■□□□□ 0.37
SNED1Q8TER0 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
SNED1Q8TER0 LINC00115-201ENST00000473798 1317 ntBASIC17.35■□□□□ 0.37
SNED1Q8TER0 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC17.35■□□□□ 0.37
SNED1Q8TER0 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNED1Q8TER0 AC138761.6-201ENST00000583997 1423 ntBASIC17.35■□□□□ 0.37
SNED1Q8TER0 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SNED1Q8TER0 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNED1Q8TER0 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SNED1Q8TER0 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNED1Q8TER0 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SNED1Q8TER0 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC17.35■□□□□ 0.37
SNED1Q8TER0 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNED1Q8TER0 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC17.35■□□□□ 0.37
SNED1Q8TER0 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNED1Q8TER0 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNED1Q8TER0 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
SNED1Q8TER0 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SNED1Q8TER0 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNED1Q8TER0 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNED1Q8TER0 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SNED1Q8TER0 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SNED1Q8TER0 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SNED1Q8TER0 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNED1Q8TER0 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNED1Q8TER0 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNED1Q8TER0 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNED1Q8TER0 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNED1Q8TER0 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
SNED1Q8TER0 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNED1Q8TER0 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SNED1Q8TER0 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.34■□□□□ 0.37
SNED1Q8TER0 RN7SL147P-201ENST00000487345 298 ntBASIC17.34■□□□□ 0.37
SNED1Q8TER0 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms