Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.39■□□□□ 0.05
RNF43Q68DV7 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF43Q68DV7 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
RNF43Q68DV7 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC15.39■□□□□ 0.05
RNF43Q68DV7 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF43Q68DV7 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC15.39■□□□□ 0.05
RNF43Q68DV7 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC15.39■□□□□ 0.05
RNF43Q68DV7 AL096828.3-201ENST00000615354 462 ntBASIC15.39■□□□□ 0.05
RNF43Q68DV7 AC128714.1-201ENST00000637035 887 ntBASIC15.39■□□□□ 0.05
RNF43Q68DV7 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF43Q68DV7 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.39■□□□□ 0.05
RNF43Q68DV7 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.39■□□□□ 0.05
RNF43Q68DV7 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF43Q68DV7 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RNF43Q68DV7 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF43Q68DV7 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.39■□□□□ 0.05
RNF43Q68DV7 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC15.39■□□□□ 0.05
RNF43Q68DV7 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
RNF43Q68DV7 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
RNF43Q68DV7 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF43Q68DV7 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RNF43Q68DV7 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF43Q68DV7 KRT8P19-201ENST00000551916 1455 ntBASIC15.39■□□□□ 0.05
RNF43Q68DV7 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF43Q68DV7 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
RNF43Q68DV7 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF43Q68DV7 AC089987.1-201ENST00000551654 2209 ntBASIC15.39■□□□□ 0.05
RNF43Q68DV7 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF43Q68DV7 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
RNF43Q68DV7 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
RNF43Q68DV7 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF43Q68DV7 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF43Q68DV7 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.38■□□□□ 0.05
RNF43Q68DV7 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF43Q68DV7 AC011840.2-201ENST00000563063 1520 ntBASIC15.38■□□□□ 0.05
RNF43Q68DV7 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.38■□□□□ 0.05
RNF43Q68DV7 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.38■□□□□ 0.05
RNF43Q68DV7 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF43Q68DV7 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF43Q68DV7 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF43Q68DV7 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
RNF43Q68DV7 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.38■□□□□ 0.05
RNF43Q68DV7 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.38■□□□□ 0.05
RNF43Q68DV7 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.38■□□□□ 0.05
RNF43Q68DV7 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF43Q68DV7 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF43Q68DV7 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF43Q68DV7 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC15.38■□□□□ 0.05
RNF43Q68DV7 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF43Q68DV7 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF43Q68DV7 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.38■□□□□ 0.05
RNF43Q68DV7 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF43Q68DV7 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RNF43Q68DV7 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
RNF43Q68DV7 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.38■□□□□ 0.05
RNF43Q68DV7 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC15.38■□□□□ 0.05
RNF43Q68DV7 RPS2P36-201ENST00000456516 831 ntBASIC15.38■□□□□ 0.05
RNF43Q68DV7 TMEM198B-204ENST00000484016 896 ntBASIC15.38■□□□□ 0.05
RNF43Q68DV7 MBP-227ENST00000526111 581 ntTSL 4 BASIC15.38■□□□□ 0.05
RNF43Q68DV7 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC15.38■□□□□ 0.05
RNF43Q68DV7 KLK11-210ENST00000600362 759 ntTSL 3 BASIC15.38■□□□□ 0.05
RNF43Q68DV7 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC15.38■□□□□ 0.05
RNF43Q68DV7 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.38■□□□□ 0.05
RNF43Q68DV7 AC138627.1-207ENST00000641560 1006 ntBASIC15.38■□□□□ 0.05
RNF43Q68DV7 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF43Q68DV7 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.38■□□□□ 0.05
RNF43Q68DV7 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RNF43Q68DV7 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15.38■□□□□ 0.05
RNF43Q68DV7 AC018529.2-202ENST00000611482 3087 ntBASIC15.38■□□□□ 0.05
RNF43Q68DV7 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF43Q68DV7 MST1P2-201ENST00000457982 2291 ntBASIC15.38■□□□□ 0.05
RNF43Q68DV7 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.38■□□□□ 0.05
RNF43Q68DV7 AC003102.2-201ENST00000589195 1469 ntBASIC15.38■□□□□ 0.05
RNF43Q68DV7 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
RNF43Q68DV7 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF43Q68DV7 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.38■□□□□ 0.05
RNF43Q68DV7 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF43Q68DV7 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.37■□□□□ 0.05
RNF43Q68DV7 INE2-201ENST00000630399 1874 ntBASIC15.37■□□□□ 0.05
RNF43Q68DV7 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
RNF43Q68DV7 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF43Q68DV7 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.37■□□□□ 0.05
RNF43Q68DV7 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.37■□□□□ 0.05
RNF43Q68DV7 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
RNF43Q68DV7 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF43Q68DV7 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF43Q68DV7 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.37■□□□□ 0.05
RNF43Q68DV7 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF43Q68DV7 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.37■□□□□ 0.05
RNF43Q68DV7 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF43Q68DV7 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
RNF43Q68DV7 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RNF43Q68DV7 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.37■□□□□ 0.05
RNF43Q68DV7 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.37■□□□□ 0.05
RNF43Q68DV7 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.37■□□□□ 0.05
RNF43Q68DV7 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC15.37■□□□□ 0.05
RNF43Q68DV7 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.37■□□□□ 0.05
RNF43Q68DV7 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC15.37■□□□□ 0.05
RNF43Q68DV7 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RNF43Q68DV7 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms