Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.13■□□□□ 0.33
CACNB3P54284 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CACNB3P54284 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CACNB3P54284 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
CACNB3P54284 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC17.13■□□□□ 0.33
CACNB3P54284 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.13■□□□□ 0.33
CACNB3P54284 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC17.13■□□□□ 0.33
CACNB3P54284 AC006372.4-201ENST00000624122 1543 ntBASIC17.13■□□□□ 0.33
CACNB3P54284 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CACNB3P54284 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CACNB3P54284 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CACNB3P54284 AL357563.1-201ENST00000404728 395 ntBASIC17.13■□□□□ 0.33
CACNB3P54284 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CACNB3P54284 AL512306.1-201ENST00000432698 848 ntBASIC17.13■□□□□ 0.33
CACNB3P54284 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CACNB3P54284 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC17.13■□□□□ 0.33
CACNB3P54284 AC007952.4-201ENST00000573866 637 ntBASIC17.13■□□□□ 0.33
CACNB3P54284 MIR5196-201ENST00000578146 115 ntBASIC17.13■□□□□ 0.33
CACNB3P54284 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC17.13■□□□□ 0.33
CACNB3P54284 AC021016.3-201ENST00000608367 477 ntBASIC17.13■□□□□ 0.33
CACNB3P54284 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CACNB3P54284 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CACNB3P54284 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CACNB3P54284 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CACNB3P54284 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CACNB3P54284 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.13■□□□□ 0.33
CACNB3P54284 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.13■□□□□ 0.33
CACNB3P54284 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CACNB3P54284 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CACNB3P54284 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC17.13■□□□□ 0.33
CACNB3P54284 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CACNB3P54284 AC067931.2-201ENST00000623655 2003 ntBASIC17.13■□□□□ 0.33
CACNB3P54284 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CACNB3P54284 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CACNB3P54284 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC17.13■□□□□ 0.33
CACNB3P54284 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CACNB3P54284 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CACNB3P54284 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CACNB3P54284 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CACNB3P54284 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CACNB3P54284 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CACNB3P54284 AL591122.2-201ENST00000624125 1853 ntBASIC17.12■□□□□ 0.33
CACNB3P54284 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CACNB3P54284 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CACNB3P54284 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CACNB3P54284 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CACNB3P54284 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CACNB3P54284 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC17.12■□□□□ 0.33
CACNB3P54284 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC17.12■□□□□ 0.33
CACNB3P54284 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CACNB3P54284 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CACNB3P54284 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CACNB3P54284 ERP29P1-201ENST00000442902 706 ntBASIC17.12■□□□□ 0.33
CACNB3P54284 DPY19L2P5-201ENST00000456300 331 ntBASIC17.12■□□□□ 0.33
CACNB3P54284 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
CACNB3P54284 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CACNB3P54284 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CACNB3P54284 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CACNB3P54284 AC023157.3-201ENST00000619086 2088 ntBASIC17.12■□□□□ 0.33
CACNB3P54284 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CACNB3P54284 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC17.12■□□□□ 0.33
CACNB3P54284 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC17.12■□□□□ 0.33
CACNB3P54284 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CACNB3P54284 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC17.12■□□□□ 0.33
CACNB3P54284 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC17.12■□□□□ 0.33
CACNB3P54284 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CACNB3P54284 AC215219.1-201ENST00000400706 1817 ntBASIC17.12■□□□□ 0.33
CACNB3P54284 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CACNB3P54284 LAP3P2-201ENST00000454686 1454 ntBASIC17.12■□□□□ 0.33
CACNB3P54284 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CACNB3P54284 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CACNB3P54284 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.11■□□□□ 0.33
CACNB3P54284 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CACNB3P54284 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC17.11■□□□□ 0.33
CACNB3P54284 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CACNB3P54284 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CACNB3P54284 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CACNB3P54284 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CACNB3P54284 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CACNB3P54284 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CACNB3P54284 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
CACNB3P54284 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CACNB3P54284 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.11■□□□□ 0.33
CACNB3P54284 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CACNB3P54284 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CACNB3P54284 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC17.11■□□□□ 0.33
CACNB3P54284 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC17.11■□□□□ 0.33
CACNB3P54284 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CACNB3P54284 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CACNB3P54284 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC17.11■□□□□ 0.33
CACNB3P54284 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC17.11■□□□□ 0.33
CACNB3P54284 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC17.11■□□□□ 0.33
CACNB3P54284 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC17.11■□□□□ 0.33
CACNB3P54284 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC17.11■□□□□ 0.33
CACNB3P54284 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC17.11■□□□□ 0.33
CACNB3P54284 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC17.11■□□□□ 0.33
CACNB3P54284 LINC00431-202ENST00000636375 159 ntBASIC17.11■□□□□ 0.33
CACNB3P54284 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CACNB3P54284 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CACNB3P54284 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms