Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
RFC4P35249 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RFC4P35249 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RFC4P35249 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RFC4P35249 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC18.08■□□□□ 0.48
RFC4P35249 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.08■□□□□ 0.48
RFC4P35249 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
RFC4P35249 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
RFC4P35249 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RFC4P35249 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
RFC4P35249 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
RFC4P35249 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFC4P35249 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFC4P35249 LCK-206ENST00000373564 2137 ntTSL 5 BASIC18.07■□□□□ 0.48
RFC4P35249 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFC4P35249 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.07■□□□□ 0.48
RFC4P35249 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFC4P35249 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFC4P35249 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RFC4P35249 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RFC4P35249 HLA-DPA2-205ENST00000433582 733 ntBASIC18.07■□□□□ 0.48
RFC4P35249 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFC4P35249 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC18.07■□□□□ 0.48
RFC4P35249 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC18.07■□□□□ 0.48
RFC4P35249 ALG1L3P-201ENST00000503331 765 ntBASIC18.07■□□□□ 0.48
RFC4P35249 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC18.07■□□□□ 0.48
RFC4P35249 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RFC4P35249 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RFC4P35249 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
RFC4P35249 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RFC4P35249 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC18.07■□□□□ 0.48
RFC4P35249 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFC4P35249 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFC4P35249 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
RFC4P35249 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RFC4P35249 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.07■□□□□ 0.48
RFC4P35249 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFC4P35249 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RFC4P35249 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
RFC4P35249 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
RFC4P35249 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.07■□□□□ 0.48
RFC4P35249 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC18.07■□□□□ 0.48
RFC4P35249 PGR-210ENST00000619228 3038 ntTSL 5 BASIC18.07■□□□□ 0.48
RFC4P35249 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RFC4P35249 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
RFC4P35249 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
RFC4P35249 AL109809.1-201ENST00000418979 1367 ntBASIC18.06■□□□□ 0.48
RFC4P35249 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFC4P35249 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC18.06■□□□□ 0.48
RFC4P35249 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RFC4P35249 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RFC4P35249 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFC4P35249 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
RFC4P35249 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
RFC4P35249 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFC4P35249 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RFC4P35249 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFC4P35249 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFC4P35249 AP000354.1-201ENST00000396982 456 ntBASIC18.06■□□□□ 0.48
RFC4P35249 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
RFC4P35249 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC18.06■□□□□ 0.48
RFC4P35249 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC18.06■□□□□ 0.48
RFC4P35249 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC18.06■□□□□ 0.48
RFC4P35249 RN7SL788P-201ENST00000460504 316 ntBASIC18.06■□□□□ 0.48
RFC4P35249 AC083801.1-201ENST00000491689 358 ntBASIC18.06■□□□□ 0.48
RFC4P35249 AC106047.2-201ENST00000511723 743 ntBASIC18.06■□□□□ 0.48
RFC4P35249 RPS23-207ENST00000511844 530 ntTSL 2 BASIC18.06■□□□□ 0.48
RFC4P35249 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
RFC4P35249 KLF17P1-201ENST00000547105 1126 ntBASIC18.06■□□□□ 0.48
RFC4P35249 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC18.06■□□□□ 0.48
RFC4P35249 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC18.06■□□□□ 0.48
RFC4P35249 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC18.06■□□□□ 0.48
RFC4P35249 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC18.06■□□□□ 0.48
RFC4P35249 ZNF436-AS1-201ENST00000335648 2547 ntBASIC18.06■□□□□ 0.48
RFC4P35249 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RFC4P35249 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC18.06■□□□□ 0.48
RFC4P35249 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RFC4P35249 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
RFC4P35249 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RFC4P35249 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC18.05■□□□□ 0.48
RFC4P35249 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RFC4P35249 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RFC4P35249 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC18.05■□□□□ 0.48
RFC4P35249 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RFC4P35249 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RFC4P35249 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
RFC4P35249 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFC4P35249 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RFC4P35249 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC18.05■□□□□ 0.48
RFC4P35249 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
RFC4P35249 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RFC4P35249 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC18.05■□□□□ 0.48
RFC4P35249 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC18.05■□□□□ 0.48
RFC4P35249 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
RFC4P35249 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC18.05■□□□□ 0.48
RFC4P35249 LINC00265-2P-201ENST00000413372 782 ntBASIC18.05■□□□□ 0.48
RFC4P35249 BX679664.3-201ENST00000414070 555 ntBASIC18.05■□□□□ 0.48
RFC4P35249 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC18.05■□□□□ 0.48
RFC4P35249 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
RFC4P35249 BPIFB5P-201ENST00000457066 1099 ntBASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms