Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RPA3P35244 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.83□□□□□ -0.04
RPA3P35244 AL596325.1-201ENST00000563991 1082 ntBASIC14.83□□□□□ -0.04
RPA3P35244 DUX4L47-201ENST00000566374 394 ntBASIC14.83□□□□□ -0.04
RPA3P35244 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
RPA3P35244 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.83□□□□□ -0.04
RPA3P35244 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.83□□□□□ -0.04
RPA3P35244 LINC02084-201ENST00000606069 1096 ntBASIC14.83□□□□□ -0.04
RPA3P35244 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.83□□□□□ -0.04
RPA3P35244 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPA3P35244 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.83□□□□□ -0.04
RPA3P35244 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPA3P35244 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPA3P35244 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
RPA3P35244 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPA3P35244 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC14.83□□□□□ -0.04
RPA3P35244 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RPA3P35244 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPA3P35244 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPA3P35244 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
RPA3P35244 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
RPA3P35244 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPA3P35244 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPA3P35244 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
RPA3P35244 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPA3P35244 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RPA3P35244 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RPA3P35244 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
RPA3P35244 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPA3P35244 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
RPA3P35244 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.83□□□□□ -0.04
RPA3P35244 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.82□□□□□ -0.04
RPA3P35244 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC14.82□□□□□ -0.04
RPA3P35244 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPA3P35244 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPA3P35244 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPA3P35244 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
RPA3P35244 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
RPA3P35244 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPA3P35244 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPA3P35244 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RPA3P35244 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RPA3P35244 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPA3P35244 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RPA3P35244 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RPA3P35244 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
RPA3P35244 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPA3P35244 AC004241.5-201ENST00000623870 2448 ntBASIC14.82□□□□□ -0.04
RPA3P35244 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RPA3P35244 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RPA3P35244 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RPA3P35244 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPA3P35244 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.82□□□□□ -0.04
RPA3P35244 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.82□□□□□ -0.04
RPA3P35244 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.82□□□□□ -0.04
RPA3P35244 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
RPA3P35244 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.82□□□□□ -0.04
RPA3P35244 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RPA3P35244 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.82□□□□□ -0.04
RPA3P35244 MIR6074-201ENST00000612054 107 ntBASIC14.82□□□□□ -0.04
RPA3P35244 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.82□□□□□ -0.04
RPA3P35244 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.82□□□□□ -0.04
RPA3P35244 AC105233.6-201ENST00000642093 218 ntBASIC14.82□□□□□ -0.04
RPA3P35244 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
RPA3P35244 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RPA3P35244 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RPA3P35244 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RPA3P35244 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.82□□□□□ -0.04
RPA3P35244 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
RPA3P35244 SALL4P5-201ENST00000419001 1760 ntBASIC14.82□□□□□ -0.04
RPA3P35244 AC072061.1-201ENST00000569710 2234 ntBASIC14.82□□□□□ -0.04
RPA3P35244 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPA3P35244 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
RPA3P35244 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RPA3P35244 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.82□□□□□ -0.04
RPA3P35244 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPA3P35244 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.82□□□□□ -0.04
RPA3P35244 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
RPA3P35244 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.82□□□□□ -0.04
RPA3P35244 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.82□□□□□ -0.04
RPA3P35244 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC14.82□□□□□ -0.04
RPA3P35244 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.82□□□□□ -0.04
RPA3P35244 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RPA3P35244 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RPA3P35244 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14.81□□□□□ -0.04
RPA3P35244 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPA3P35244 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPA3P35244 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.81□□□□□ -0.04
RPA3P35244 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
RPA3P35244 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC14.81□□□□□ -0.04
RPA3P35244 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RPA3P35244 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RPA3P35244 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPA3P35244 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
RPA3P35244 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPA3P35244 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPA3P35244 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.81□□□□□ -0.04
RPA3P35244 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
RPA3P35244 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.81□□□□□ -0.04
RPA3P35244 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms