Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
KCNA3P22001 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC17.52■□□□□ 0.4
KCNA3P22001 AC068418.2-201ENST00000577309 3703 ntBASIC17.52■□□□□ 0.4
KCNA3P22001 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
KCNA3P22001 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
KCNA3P22001 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
KCNA3P22001 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
KCNA3P22001 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
KCNA3P22001 OR6D1P-203ENST00000641209 4860 ntBASIC17.52■□□□□ 0.4
KCNA3P22001 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
KCNA3P22001 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.52■□□□□ 0.4
KCNA3P22001 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KCNA3P22001 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KCNA3P22001 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
KCNA3P22001 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
KCNA3P22001 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
KCNA3P22001 HNRNPA1P56-201ENST00000505767 954 ntBASIC17.52■□□□□ 0.4
KCNA3P22001 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC17.52■□□□□ 0.4
KCNA3P22001 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
KCNA3P22001 AC120498.7-201ENST00000562876 330 ntBASIC17.52■□□□□ 0.4
KCNA3P22001 AC006116.2-201ENST00000589958 988 ntBASIC17.52■□□□□ 0.4
KCNA3P22001 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC17.52■□□□□ 0.4
KCNA3P22001 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC17.52■□□□□ 0.4
KCNA3P22001 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC17.52■□□□□ 0.4
KCNA3P22001 URAHP-205ENST00000610227 398 ntBASIC17.52■□□□□ 0.4
KCNA3P22001 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC17.52■□□□□ 0.4
KCNA3P22001 AC126755.5-201ENST00000622756 267 ntBASIC17.52■□□□□ 0.4
KCNA3P22001 ESR1-214ENST00000638569 132 ntTSL 5 BASIC17.52■□□□□ 0.4
KCNA3P22001 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.52■□□□□ 0.4
KCNA3P22001 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
KCNA3P22001 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
KCNA3P22001 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KCNA3P22001 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
KCNA3P22001 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
KCNA3P22001 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
KCNA3P22001 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
KCNA3P22001 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
KCNA3P22001 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
KCNA3P22001 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.52■□□□□ 0.39
KCNA3P22001 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC17.52■□□□□ 0.39
KCNA3P22001 CCT8L1P-201ENST00000465400 1674 ntBASIC17.52■□□□□ 0.39
KCNA3P22001 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
KCNA3P22001 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KCNA3P22001 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KCNA3P22001 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
KCNA3P22001 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
KCNA3P22001 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
KCNA3P22001 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KCNA3P22001 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
KCNA3P22001 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.51■□□□□ 0.39
KCNA3P22001 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
KCNA3P22001 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KCNA3P22001 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
KCNA3P22001 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
KCNA3P22001 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KCNA3P22001 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KCNA3P22001 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC17.51■□□□□ 0.39
KCNA3P22001 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KCNA3P22001 AC073210.1-201ENST00000414799 232 ntBASIC17.51■□□□□ 0.39
KCNA3P22001 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
KCNA3P22001 HNRNPA1P21-201ENST00000424115 961 ntBASIC17.51■□□□□ 0.39
KCNA3P22001 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
KCNA3P22001 SF1-209ENST00000433274 2317 ntTSL 2 BASIC17.51■□□□□ 0.39
KCNA3P22001 NALT1-202ENST00000450304 437 ntTSL 3 BASIC17.51■□□□□ 0.39
KCNA3P22001 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC17.51■□□□□ 0.39
KCNA3P22001 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC17.51■□□□□ 0.39
KCNA3P22001 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
KCNA3P22001 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC17.51■□□□□ 0.39
KCNA3P22001 GPX3-202ENST00000517973 612 ntTSL 3 BASIC17.51■□□□□ 0.39
KCNA3P22001 MAX-218ENST00000557746 571 ntTSL 4 BASIC17.51■□□□□ 0.39
KCNA3P22001 SRP14-208ENST00000560773 468 ntTSL 3 BASIC17.51■□□□□ 0.39
KCNA3P22001 NEK4P3-201ENST00000604859 544 ntBASIC17.51■□□□□ 0.39
KCNA3P22001 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC17.51■□□□□ 0.39
KCNA3P22001 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC17.51■□□□□ 0.39
KCNA3P22001 AL591424.3-201ENST00000614278 872 ntBASIC17.51■□□□□ 0.39
KCNA3P22001 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC17.51■□□□□ 0.39
KCNA3P22001 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KCNA3P22001 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KCNA3P22001 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
KCNA3P22001 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
KCNA3P22001 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KCNA3P22001 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.51■□□□□ 0.39
KCNA3P22001 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC17.51■□□□□ 0.39
KCNA3P22001 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.51■□□□□ 0.39
KCNA3P22001 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
KCNA3P22001 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.51■□□□□ 0.39
KCNA3P22001 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
KCNA3P22001 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
KCNA3P22001 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KCNA3P22001 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
KCNA3P22001 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC17.5■□□□□ 0.39
KCNA3P22001 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.5■□□□□ 0.39
KCNA3P22001 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KCNA3P22001 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.5■□□□□ 0.39
KCNA3P22001 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
KCNA3P22001 ACE3P-201ENST00000423435 1973 ntBASIC17.5■□□□□ 0.39
KCNA3P22001 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
KCNA3P22001 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC17.5■□□□□ 0.39
KCNA3P22001 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
KCNA3P22001 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms