Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.22■□□□□ 0.19
ATP2A2P16615 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATP2A2P16615 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATP2A2P16615 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC16.22■□□□□ 0.19
ATP2A2P16615 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.22■□□□□ 0.19
ATP2A2P16615 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATP2A2P16615 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATP2A2P16615 AC009093.2-202ENST00000620513 2079 ntBASIC16.22■□□□□ 0.19
ATP2A2P16615 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATP2A2P16615 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ATP2A2P16615 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATP2A2P16615 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATP2A2P16615 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.21■□□□□ 0.19
ATP2A2P16615 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
ATP2A2P16615 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATP2A2P16615 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
ATP2A2P16615 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATP2A2P16615 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATP2A2P16615 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATP2A2P16615 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ATP2A2P16615 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.21■□□□□ 0.19
ATP2A2P16615 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ATP2A2P16615 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ATP2A2P16615 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATP2A2P16615 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC16.21■□□□□ 0.19
ATP2A2P16615 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ATP2A2P16615 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.21■□□□□ 0.19
ATP2A2P16615 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC16.21■□□□□ 0.19
ATP2A2P16615 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC16.21■□□□□ 0.19
ATP2A2P16615 RN7SL258P-201ENST00000478664 300 ntBASIC16.21■□□□□ 0.19
ATP2A2P16615 RN7SL67P-201ENST00000492147 296 ntBASIC16.21■□□□□ 0.19
ATP2A2P16615 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC16.21■□□□□ 0.19
ATP2A2P16615 DNM1P30-201ENST00000563586 452 ntBASIC16.21■□□□□ 0.19
ATP2A2P16615 STUB1-204ENST00000564370 875 ntTSL 2 BASIC16.21■□□□□ 0.19
ATP2A2P16615 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC16.21■□□□□ 0.19
ATP2A2P16615 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ATP2A2P16615 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC16.21■□□□□ 0.19
ATP2A2P16615 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
ATP2A2P16615 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
ATP2A2P16615 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
ATP2A2P16615 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATP2A2P16615 CICP14-201ENST00000629111 2732 ntBASIC16.21■□□□□ 0.19
ATP2A2P16615 MBLAC2-202ENST00000514906 1936 ntBASIC16.21■□□□□ 0.19
ATP2A2P16615 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
ATP2A2P16615 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATP2A2P16615 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.21■□□□□ 0.18
ATP2A2P16615 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
ATP2A2P16615 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
ATP2A2P16615 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
ATP2A2P16615 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
ATP2A2P16615 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.21■□□□□ 0.18
ATP2A2P16615 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP2A2P16615 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
ATP2A2P16615 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ATP2A2P16615 AL008718.2-201ENST00000609206 1313 ntBASIC16.2■□□□□ 0.18
ATP2A2P16615 INE2-201ENST00000630399 1874 ntBASIC16.2■□□□□ 0.18
ATP2A2P16615 C18orf15-201ENST00000623680 2534 ntBASIC16.2■□□□□ 0.18
ATP2A2P16615 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
ATP2A2P16615 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
ATP2A2P16615 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ATP2A2P16615 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP2A2P16615 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
ATP2A2P16615 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
ATP2A2P16615 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP2A2P16615 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP2A2P16615 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP2A2P16615 OR2K2-202ENST00000374428 1038 ntBASIC16.2■□□□□ 0.18
ATP2A2P16615 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP2A2P16615 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ATP2A2P16615 RPL8P2-201ENST00000430538 502 ntBASIC16.2■□□□□ 0.18
ATP2A2P16615 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC16.2■□□□□ 0.18
ATP2A2P16615 CCNC-217ENST00000523985 958 ntTSL 2 BASIC16.2■□□□□ 0.18
ATP2A2P16615 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ATP2A2P16615 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.2■□□□□ 0.18
ATP2A2P16615 TPM1-223ENST00000560445 485 ntTSL 3 BASIC16.2■□□□□ 0.18
ATP2A2P16615 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC16.2■□□□□ 0.18
ATP2A2P16615 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC16.2■□□□□ 0.18
ATP2A2P16615 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
ATP2A2P16615 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC16.2■□□□□ 0.18
ATP2A2P16615 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC16.2■□□□□ 0.18
ATP2A2P16615 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC16.2■□□□□ 0.18
ATP2A2P16615 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP2A2P16615 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP2A2P16615 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.2■□□□□ 0.18
ATP2A2P16615 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP2A2P16615 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP2A2P16615 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
ATP2A2P16615 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP2A2P16615 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP2A2P16615 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP2A2P16615 AC112693.3-201ENST00000624819 1983 ntBASIC16.2■□□□□ 0.18
ATP2A2P16615 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ATP2A2P16615 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP2A2P16615 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.2■□□□□ 0.18
ATP2A2P16615 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP2A2P16615 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP2A2P16615 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP2A2P16615 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
ATP2A2P16615 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP2A2P16615 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms