Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.74□□□□□ -0.05
GPC4O75487 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
GPC4O75487 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
GPC4O75487 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
GPC4O75487 AC063926.2-201ENST00000623766 1308 ntBASIC14.74□□□□□ -0.05
GPC4O75487 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.74□□□□□ -0.05
GPC4O75487 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
GPC4O75487 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.74□□□□□ -0.05
GPC4O75487 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.74□□□□□ -0.05
GPC4O75487 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.74□□□□□ -0.05
GPC4O75487 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GPC4O75487 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GPC4O75487 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GPC4O75487 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GPC4O75487 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.74□□□□□ -0.05
GPC4O75487 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
GPC4O75487 CNN2P8-201ENST00000421872 913 ntBASIC14.74□□□□□ -0.05
GPC4O75487 AC005034.1-201ENST00000426657 489 ntBASIC14.74□□□□□ -0.05
GPC4O75487 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.74□□□□□ -0.05
GPC4O75487 AC016694.1-201ENST00000434179 700 ntBASIC14.74□□□□□ -0.05
GPC4O75487 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
GPC4O75487 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.74□□□□□ -0.05
GPC4O75487 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.74□□□□□ -0.05
GPC4O75487 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.74□□□□□ -0.05
GPC4O75487 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.74□□□□□ -0.05
GPC4O75487 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.74□□□□□ -0.05
GPC4O75487 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.74□□□□□ -0.05
GPC4O75487 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
GPC4O75487 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GPC4O75487 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
GPC4O75487 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.74□□□□□ -0.05
GPC4O75487 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC14.74□□□□□ -0.05
GPC4O75487 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
GPC4O75487 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
GPC4O75487 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GPC4O75487 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.74□□□□□ -0.05
GPC4O75487 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
GPC4O75487 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
GPC4O75487 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GPC4O75487 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GPC4O75487 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
GPC4O75487 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.74□□□□□ -0.05
GPC4O75487 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
GPC4O75487 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.74□□□□□ -0.05
GPC4O75487 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
GPC4O75487 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
GPC4O75487 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
GPC4O75487 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GPC4O75487 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
GPC4O75487 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GPC4O75487 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
GPC4O75487 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GPC4O75487 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
GPC4O75487 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
GPC4O75487 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GPC4O75487 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
GPC4O75487 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GPC4O75487 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
GPC4O75487 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.73□□□□□ -0.05
GPC4O75487 AL138725.1-201ENST00000407347 1314 ntBASIC14.73□□□□□ -0.05
GPC4O75487 CLUHP2-201ENST00000426660 1303 ntBASIC14.73□□□□□ -0.05
GPC4O75487 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
GPC4O75487 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
GPC4O75487 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
GPC4O75487 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
GPC4O75487 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.73□□□□□ -0.05
GPC4O75487 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GPC4O75487 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
GPC4O75487 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.73□□□□□ -0.05
GPC4O75487 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
GPC4O75487 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.73□□□□□ -0.05
GPC4O75487 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GPC4O75487 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GPC4O75487 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
GPC4O75487 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.73□□□□□ -0.05
GPC4O75487 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.73□□□□□ -0.05
GPC4O75487 TLE1P1-201ENST00000422965 589 ntBASIC14.73□□□□□ -0.05
GPC4O75487 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.73□□□□□ -0.05
GPC4O75487 KRT43P-201ENST00000434019 910 ntBASIC14.73□□□□□ -0.05
GPC4O75487 C2orf27AP3-201ENST00000434123 579 ntBASIC14.73□□□□□ -0.05
GPC4O75487 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.73□□□□□ -0.05
GPC4O75487 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GPC4O75487 AC007551.1-201ENST00000457394 519 ntBASIC14.73□□□□□ -0.05
GPC4O75487 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.73□□□□□ -0.05
GPC4O75487 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
GPC4O75487 RNA5SP486-201ENST00000515961 83 ntBASIC14.73□□□□□ -0.05
GPC4O75487 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.73□□□□□ -0.05
GPC4O75487 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.73□□□□□ -0.05
GPC4O75487 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.73□□□□□ -0.05
GPC4O75487 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.73□□□□□ -0.05
GPC4O75487 AC244669.2-201ENST00000612320 853 ntBASIC14.73□□□□□ -0.05
GPC4O75487 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.73□□□□□ -0.05
GPC4O75487 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
GPC4O75487 AL354718.3-201ENST00000616414 581 ntBASIC14.73□□□□□ -0.05
GPC4O75487 AL162274.1-201ENST00000617191 1098 ntBASIC14.73□□□□□ -0.05
GPC4O75487 CR382287.1-201ENST00000623954 586 ntBASIC14.73□□□□□ -0.05
GPC4O75487 AL035252.4-201ENST00000624174 288 ntBASIC14.73□□□□□ -0.05
GPC4O75487 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GPC4O75487 AC003102.2-201ENST00000589195 1469 ntBASIC14.73□□□□□ -0.05
GPC4O75487 TP73-211ENST00000604074 4806 ntTSL 5 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms