Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAF3IP2O43734 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC13.03□□□□□ -0.32
TRAF3IP2O43734 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
TRAF3IP2O43734 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.03□□□□□ -0.32
TRAF3IP2O43734 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.03□□□□□ -0.32
TRAF3IP2O43734 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.03□□□□□ -0.32
TRAF3IP2O43734 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAF3IP2O43734 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAF3IP2O43734 AC136759.1-202ENST00000530858 2194 ntBASIC13.03□□□□□ -0.32
TRAF3IP2O43734 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRAF3IP2O43734 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRAF3IP2O43734 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.02□□□□□ -0.32
TRAF3IP2O43734 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
TRAF3IP2O43734 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRAF3IP2O43734 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRAF3IP2O43734 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRAF3IP2O43734 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TRAF3IP2O43734 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.02□□□□□ -0.32
TRAF3IP2O43734 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TRAF3IP2O43734 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRAF3IP2O43734 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TRAF3IP2O43734 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TRAF3IP2O43734 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
TRAF3IP2O43734 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRAF3IP2O43734 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
TRAF3IP2O43734 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRAF3IP2O43734 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TRAF3IP2O43734 AC016397.2-201ENST00000624848 1985 ntBASIC13.02□□□□□ -0.32
TRAF3IP2O43734 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
TRAF3IP2O43734 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAF3IP2O43734 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRAF3IP2O43734 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.02□□□□□ -0.33
TRAF3IP2O43734 AL354877.1-201ENST00000424412 413 ntBASIC13.02□□□□□ -0.33
TRAF3IP2O43734 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAF3IP2O43734 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRAF3IP2O43734 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
TRAF3IP2O43734 ATP5G2P4-201ENST00000442175 420 ntBASIC13.02□□□□□ -0.33
TRAF3IP2O43734 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.02□□□□□ -0.33
TRAF3IP2O43734 BNIP3P42-201ENST00000454982 569 ntBASIC13.02□□□□□ -0.33
TRAF3IP2O43734 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC13.02□□□□□ -0.33
TRAF3IP2O43734 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.02□□□□□ -0.33
TRAF3IP2O43734 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC13.02□□□□□ -0.33
TRAF3IP2O43734 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.02□□□□□ -0.33
TRAF3IP2O43734 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.02□□□□□ -0.33
TRAF3IP2O43734 NOP2-220ENST00000545915 630 ntTSL 2 BASIC13.02□□□□□ -0.33
TRAF3IP2O43734 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
TRAF3IP2O43734 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.02□□□□□ -0.33
TRAF3IP2O43734 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.02□□□□□ -0.33
TRAF3IP2O43734 BNIP3P29-201ENST00000598302 571 ntBASIC13.02□□□□□ -0.33
TRAF3IP2O43734 MIR6720-201ENST00000611664 98 ntBASIC13.02□□□□□ -0.33
TRAF3IP2O43734 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.02□□□□□ -0.33
TRAF3IP2O43734 AC011447.5-201ENST00000616168 564 ntBASIC13.02□□□□□ -0.33
TRAF3IP2O43734 AC009542.2-202ENST00000619004 1067 ntBASIC13.02□□□□□ -0.33
TRAF3IP2O43734 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAF3IP2O43734 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRAF3IP2O43734 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
TRAF3IP2O43734 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
TRAF3IP2O43734 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
TRAF3IP2O43734 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAF3IP2O43734 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAF3IP2O43734 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
TRAF3IP2O43734 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.02□□□□□ -0.33
TRAF3IP2O43734 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAF3IP2O43734 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAF3IP2O43734 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.02□□□□□ -0.33
TRAF3IP2O43734 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.02□□□□□ -0.33
TRAF3IP2O43734 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.02□□□□□ -0.33
TRAF3IP2O43734 AC244394.1-201ENST00000435000 1665 ntBASIC13.02□□□□□ -0.33
TRAF3IP2O43734 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.02□□□□□ -0.33
TRAF3IP2O43734 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
TRAF3IP2O43734 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAF3IP2O43734 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.02□□□□□ -0.33
TRAF3IP2O43734 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF3IP2O43734 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
TRAF3IP2O43734 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF3IP2O43734 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF3IP2O43734 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.01□□□□□ -0.33
TRAF3IP2O43734 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF3IP2O43734 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF3IP2O43734 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.01□□□□□ -0.33
TRAF3IP2O43734 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF3IP2O43734 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF3IP2O43734 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF3IP2O43734 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF3IP2O43734 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF3IP2O43734 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF3IP2O43734 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF3IP2O43734 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.01□□□□□ -0.33
TRAF3IP2O43734 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF3IP2O43734 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
TRAF3IP2O43734 FAM21FP-201ENST00000426241 1131 ntBASIC13.01□□□□□ -0.33
TRAF3IP2O43734 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.01□□□□□ -0.33
TRAF3IP2O43734 AL157407.1-201ENST00000435784 904 ntBASIC13.01□□□□□ -0.33
TRAF3IP2O43734 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.01□□□□□ -0.33
TRAF3IP2O43734 RNA5SP412-201ENST00000516234 123 ntBASIC13.01□□□□□ -0.33
TRAF3IP2O43734 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
TRAF3IP2O43734 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.01□□□□□ -0.33
TRAF3IP2O43734 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
TRAF3IP2O43734 AC010328.2-201ENST00000597698 1111 ntBASIC13.01□□□□□ -0.33
TRAF3IP2O43734 AL359881.2-201ENST00000602973 570 ntBASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms