Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.56■□□□□ 0.08
RCCD1A6NED2 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RCCD1A6NED2 AC145423.3-201ENST00000615987 467 ntBASIC15.56■□□□□ 0.08
RCCD1A6NED2 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC15.56■□□□□ 0.08
RCCD1A6NED2 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RCCD1A6NED2 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
RCCD1A6NED2 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RCCD1A6NED2 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RCCD1A6NED2 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC15.56■□□□□ 0.08
RCCD1A6NED2 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
RCCD1A6NED2 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC15.56■□□□□ 0.08
RCCD1A6NED2 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
RCCD1A6NED2 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC15.56■□□□□ 0.08
RCCD1A6NED2 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC15.56■□□□□ 0.08
RCCD1A6NED2 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
RCCD1A6NED2 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RCCD1A6NED2 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RCCD1A6NED2 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC15.55■□□□□ 0.08
RCCD1A6NED2 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RCCD1A6NED2 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC15.55■□□□□ 0.08
RCCD1A6NED2 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
RCCD1A6NED2 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC15.55■□□□□ 0.08
RCCD1A6NED2 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RCCD1A6NED2 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC15.55■□□□□ 0.08
RCCD1A6NED2 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RCCD1A6NED2 AL138709.1-201ENST00000614840 1693 ntBASIC15.55■□□□□ 0.08
RCCD1A6NED2 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RCCD1A6NED2 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RCCD1A6NED2 AP000593.2-201ENST00000542775 1433 ntBASIC15.55■□□□□ 0.08
RCCD1A6NED2 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RCCD1A6NED2 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RCCD1A6NED2 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.55■□□□□ 0.08
RCCD1A6NED2 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RCCD1A6NED2 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RCCD1A6NED2 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RCCD1A6NED2 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.55■□□□□ 0.08
RCCD1A6NED2 AC004945.1-201ENST00000416738 983 ntBASIC15.55■□□□□ 0.08
RCCD1A6NED2 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.55■□□□□ 0.08
RCCD1A6NED2 AL603841.1-201ENST00000430516 664 ntBASIC15.55■□□□□ 0.08
RCCD1A6NED2 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RCCD1A6NED2 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RCCD1A6NED2 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RCCD1A6NED2 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
RCCD1A6NED2 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RCCD1A6NED2 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RCCD1A6NED2 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RCCD1A6NED2 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.55■□□□□ 0.08
RCCD1A6NED2 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.55■□□□□ 0.08
RCCD1A6NED2 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.55■□□□□ 0.08
RCCD1A6NED2 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RCCD1A6NED2 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC15.55■□□□□ 0.08
RCCD1A6NED2 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.55■□□□□ 0.08
RCCD1A6NED2 AC104506.1-201ENST00000609247 429 ntBASIC15.55■□□□□ 0.08
RCCD1A6NED2 BAP1-211ENST00000615113 489 ntBASIC15.55■□□□□ 0.08
RCCD1A6NED2 ENPP7P14-201ENST00000621765 1040 ntBASIC15.55■□□□□ 0.08
RCCD1A6NED2 RPSAP52-203ENST00000622976 1023 ntBASIC15.55■□□□□ 0.08
RCCD1A6NED2 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.55■□□□□ 0.08
RCCD1A6NED2 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RCCD1A6NED2 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RCCD1A6NED2 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RCCD1A6NED2 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RCCD1A6NED2 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RCCD1A6NED2 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RCCD1A6NED2 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC15.55■□□□□ 0.08
RCCD1A6NED2 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
RCCD1A6NED2 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
RCCD1A6NED2 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RCCD1A6NED2 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RCCD1A6NED2 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RCCD1A6NED2 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RCCD1A6NED2 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
RCCD1A6NED2 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RCCD1A6NED2 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.54■□□□□ 0.08
RCCD1A6NED2 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RCCD1A6NED2 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
RCCD1A6NED2 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RCCD1A6NED2 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.54■□□□□ 0.08
RCCD1A6NED2 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.54■□□□□ 0.08
RCCD1A6NED2 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RCCD1A6NED2 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RCCD1A6NED2 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC15.54■□□□□ 0.08
RCCD1A6NED2 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RCCD1A6NED2 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.54■□□□□ 0.08
RCCD1A6NED2 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC15.54■□□□□ 0.08
RCCD1A6NED2 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RCCD1A6NED2 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RCCD1A6NED2 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RCCD1A6NED2 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RCCD1A6NED2 ARSEP1-201ENST00000420443 635 ntBASIC15.54■□□□□ 0.08
RCCD1A6NED2 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.54■□□□□ 0.08
RCCD1A6NED2 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC15.54■□□□□ 0.08
RCCD1A6NED2 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC15.54■□□□□ 0.08
RCCD1A6NED2 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.54■□□□□ 0.08
RCCD1A6NED2 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.54■□□□□ 0.08
RCCD1A6NED2 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC15.54■□□□□ 0.08
RCCD1A6NED2 AP003171.2-201ENST00000528208 925 ntBASIC15.54■□□□□ 0.08
RCCD1A6NED2 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.54■□□□□ 0.08
RCCD1A6NED2 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
RCCD1A6NED2 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
RCCD1A6NED2 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms