Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 INTS4P2-202ENST00000614726 2019 ntBASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 KLF2P2-201ENST00000416807 1039 ntBASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 AC241585.1-201ENST00000433527 519 ntBASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 RASL12-203ENST00000434605 982 ntTSL 2 BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 EIF3FP3-201ENST00000434851 1086 ntBASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 GCOM2-201ENST00000509133 1104 ntBASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 AP001582.1-201ENST00000525856 295 ntBASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 AC135586.1-201ENST00000539323 574 ntBASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 AC103988.2-201ENST00000561804 725 ntBASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 PRR29-204ENST00000577953 565 ntTSL 4 BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 BRI3BPP1-201ENST00000594224 787 ntBASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 AL138725.1-201ENST00000407347 1314 ntBASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 KHSRPP1-201ENST00000427983 1768 ntBASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 AC005562.1-201ENST00000583030 3219 ntBASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 AC139712.1-201ENST00000378256 1875 ntBASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 AC068760.1-201ENST00000493579 1953 ntBASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 AL023775.1-201ENST00000454907 1746 ntBASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 AL356585.2-201ENST00000625078 2396 ntBASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
UBE2D4Q9Y2X8 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms