Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMG20BQ9P0W2 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC17.73■□□□□ 0.43
HMG20BQ9P0W2 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC17.73■□□□□ 0.43
HMG20BQ9P0W2 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC17.73■□□□□ 0.43
HMG20BQ9P0W2 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC17.73■□□□□ 0.43
HMG20BQ9P0W2 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC17.73■□□□□ 0.43
HMG20BQ9P0W2 IMP3P2-201ENST00000489760 475 ntBASIC17.73■□□□□ 0.43
HMG20BQ9P0W2 NUP210P1-202ENST00000504322 710 ntBASIC17.73■□□□□ 0.43
HMG20BQ9P0W2 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC17.73■□□□□ 0.43
HMG20BQ9P0W2 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC17.73■□□□□ 0.43
HMG20BQ9P0W2 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC17.73■□□□□ 0.43
HMG20BQ9P0W2 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMG20BQ9P0W2 AL161670.2-201ENST00000557650 1227 ntBASIC17.73■□□□□ 0.43
HMG20BQ9P0W2 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
HMG20BQ9P0W2 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC17.73■□□□□ 0.43
HMG20BQ9P0W2 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC17.73■□□□□ 0.43
HMG20BQ9P0W2 CU633904.3-201ENST00000624042 1029 ntBASIC17.73■□□□□ 0.43
HMG20BQ9P0W2 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC17.73■□□□□ 0.43
HMG20BQ9P0W2 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMG20BQ9P0W2 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMG20BQ9P0W2 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMG20BQ9P0W2 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMG20BQ9P0W2 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC17.73■□□□□ 0.43
HMG20BQ9P0W2 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
HMG20BQ9P0W2 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMG20BQ9P0W2 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMG20BQ9P0W2 TKT-201ENST00000296289 1931 ntTSL 5 BASIC17.72■□□□□ 0.43
HMG20BQ9P0W2 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HMG20BQ9P0W2 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMG20BQ9P0W2 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMG20BQ9P0W2 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HMG20BQ9P0W2 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMG20BQ9P0W2 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMG20BQ9P0W2 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
HMG20BQ9P0W2 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMG20BQ9P0W2 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMG20BQ9P0W2 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC17.72■□□□□ 0.43
HMG20BQ9P0W2 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HMG20BQ9P0W2 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMG20BQ9P0W2 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HMG20BQ9P0W2 KRT8P21-201ENST00000430398 1491 ntBASIC17.72■□□□□ 0.43
HMG20BQ9P0W2 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HMG20BQ9P0W2 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HMG20BQ9P0W2 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMG20BQ9P0W2 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMG20BQ9P0W2 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMG20BQ9P0W2 CCNC-217ENST00000523985 958 ntTSL 2 BASIC17.72■□□□□ 0.43
HMG20BQ9P0W2 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HMG20BQ9P0W2 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC17.72■□□□□ 0.43
HMG20BQ9P0W2 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC17.72■□□□□ 0.43
HMG20BQ9P0W2 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC17.72■□□□□ 0.43
HMG20BQ9P0W2 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC17.72■□□□□ 0.43
HMG20BQ9P0W2 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC17.72■□□□□ 0.43
HMG20BQ9P0W2 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HMG20BQ9P0W2 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC17.72■□□□□ 0.43
HMG20BQ9P0W2 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
HMG20BQ9P0W2 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC17.72■□□□□ 0.43
HMG20BQ9P0W2 NAP1L6-202ENST00000641404 1222 ntBASIC17.72■□□□□ 0.43
HMG20BQ9P0W2 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC17.72■□□□□ 0.43
HMG20BQ9P0W2 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
HMG20BQ9P0W2 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMG20BQ9P0W2 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMG20BQ9P0W2 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMG20BQ9P0W2 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
HMG20BQ9P0W2 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMG20BQ9P0W2 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMG20BQ9P0W2 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HMG20BQ9P0W2 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMG20BQ9P0W2 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC17.72■□□□□ 0.43
HMG20BQ9P0W2 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMG20BQ9P0W2 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMG20BQ9P0W2 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
HMG20BQ9P0W2 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
HMG20BQ9P0W2 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
HMG20BQ9P0W2 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC17.71■□□□□ 0.43
HMG20BQ9P0W2 MYADML-201ENST00000474610 2147 ntBASIC17.71■□□□□ 0.43
HMG20BQ9P0W2 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMG20BQ9P0W2 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HMG20BQ9P0W2 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
HMG20BQ9P0W2 HSPA7-201ENST00000445535 1927 ntBASIC17.71■□□□□ 0.43
HMG20BQ9P0W2 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC17.71■□□□□ 0.43
HMG20BQ9P0W2 GAS5-209ENST00000430245 723 ntTSL 3 BASIC17.71■□□□□ 0.43
HMG20BQ9P0W2 OR2R1P-201ENST00000441404 914 ntBASIC17.71■□□□□ 0.43
HMG20BQ9P0W2 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC17.71■□□□□ 0.43
HMG20BQ9P0W2 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC17.71■□□□□ 0.43
HMG20BQ9P0W2 AC245884.6-201ENST00000515672 1067 ntBASIC17.71■□□□□ 0.43
HMG20BQ9P0W2 ARL16-210ENST00000574938 751 ntTSL 2 BASIC17.71■□□□□ 0.43
HMG20BQ9P0W2 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMG20BQ9P0W2 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC17.71■□□□□ 0.43
HMG20BQ9P0W2 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMG20BQ9P0W2 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
HMG20BQ9P0W2 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC17.71■□□□□ 0.43
HMG20BQ9P0W2 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
HMG20BQ9P0W2 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC17.71■□□□□ 0.43
HMG20BQ9P0W2 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMG20BQ9P0W2 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
HMG20BQ9P0W2 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
HMG20BQ9P0W2 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC17.71■□□□□ 0.42
HMG20BQ9P0W2 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.42
HMG20BQ9P0W2 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms