Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TM9SF2Q99805 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TM9SF2Q99805 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TM9SF2Q99805 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TM9SF2Q99805 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TM9SF2Q99805 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TM9SF2Q99805 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.69□□□□□ -0.22
TM9SF2Q99805 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TM9SF2Q99805 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TM9SF2Q99805 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TM9SF2Q99805 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.69□□□□□ -0.22
TM9SF2Q99805 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TM9SF2Q99805 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TM9SF2Q99805 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TM9SF2Q99805 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TM9SF2Q99805 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
TM9SF2Q99805 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.69□□□□□ -0.22
TM9SF2Q99805 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TM9SF2Q99805 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TM9SF2Q99805 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.69□□□□□ -0.22
TM9SF2Q99805 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TM9SF2Q99805 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TM9SF2Q99805 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.69□□□□□ -0.22
TM9SF2Q99805 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TM9SF2Q99805 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TM9SF2Q99805 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
TM9SF2Q99805 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TM9SF2Q99805 ACTBP8-201ENST00000403258 1108 ntBASIC13.69□□□□□ -0.22
TM9SF2Q99805 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TM9SF2Q99805 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.69□□□□□ -0.22
TM9SF2Q99805 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.69□□□□□ -0.22
TM9SF2Q99805 HLA-V-201ENST00000429037 534 ntBASIC13.69□□□□□ -0.22
TM9SF2Q99805 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TM9SF2Q99805 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.69□□□□□ -0.22
TM9SF2Q99805 YBX1P6-201ENST00000442962 1002 ntBASIC13.69□□□□□ -0.22
TM9SF2Q99805 CSF2RBP1-201ENST00000447905 391 ntBASIC13.69□□□□□ -0.22
TM9SF2Q99805 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TM9SF2Q99805 RNA5SP412-201ENST00000516234 123 ntBASIC13.69□□□□□ -0.22
TM9SF2Q99805 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.69□□□□□ -0.22
TM9SF2Q99805 KRT90P-201ENST00000549264 1064 ntBASIC13.69□□□□□ -0.22
TM9SF2Q99805 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TM9SF2Q99805 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.69□□□□□ -0.22
TM9SF2Q99805 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.69□□□□□ -0.22
TM9SF2Q99805 AC025279.2-201ENST00000569730 653 ntBASIC13.69□□□□□ -0.22
TM9SF2Q99805 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TM9SF2Q99805 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.69□□□□□ -0.22
TM9SF2Q99805 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.69□□□□□ -0.22
TM9SF2Q99805 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TM9SF2Q99805 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TM9SF2Q99805 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC13.69□□□□□ -0.22
TM9SF2Q99805 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
TM9SF2Q99805 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TM9SF2Q99805 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.69□□□□□ -0.22
TM9SF2Q99805 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TM9SF2Q99805 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TM9SF2Q99805 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TM9SF2Q99805 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.69□□□□□ -0.22
TM9SF2Q99805 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TM9SF2Q99805 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.69□□□□□ -0.22
TM9SF2Q99805 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TM9SF2Q99805 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TM9SF2Q99805 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TM9SF2Q99805 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TM9SF2Q99805 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
TM9SF2Q99805 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
TM9SF2Q99805 AC027612.1-201ENST00000445234 2395 ntBASIC13.68□□□□□ -0.22
TM9SF2Q99805 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TM9SF2Q99805 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.68□□□□□ -0.22
TM9SF2Q99805 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TM9SF2Q99805 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TM9SF2Q99805 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.68□□□□□ -0.22
TM9SF2Q99805 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
TM9SF2Q99805 AC093525.8-201ENST00000624099 1342 ntBASIC13.68□□□□□ -0.22
TM9SF2Q99805 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TM9SF2Q99805 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
TM9SF2Q99805 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TM9SF2Q99805 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TM9SF2Q99805 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TM9SF2Q99805 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TM9SF2Q99805 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TM9SF2Q99805 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TM9SF2Q99805 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TM9SF2Q99805 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TM9SF2Q99805 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TM9SF2Q99805 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.68□□□□□ -0.22
TM9SF2Q99805 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.68□□□□□ -0.22
TM9SF2Q99805 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TM9SF2Q99805 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.68□□□□□ -0.22
TM9SF2Q99805 KLF2P2-201ENST00000416807 1039 ntBASIC13.68□□□□□ -0.22
TM9SF2Q99805 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TM9SF2Q99805 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TM9SF2Q99805 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TM9SF2Q99805 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.68□□□□□ -0.22
TM9SF2Q99805 BNIP3P42-201ENST00000454982 569 ntBASIC13.68□□□□□ -0.22
TM9SF2Q99805 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.68□□□□□ -0.22
TM9SF2Q99805 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.68□□□□□ -0.22
TM9SF2Q99805 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.68□□□□□ -0.22
TM9SF2Q99805 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC13.68□□□□□ -0.22
TM9SF2Q99805 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.68□□□□□ -0.22
TM9SF2Q99805 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms