Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 WDR54-202ENST00000409791 854 ntTSL 3 BASIC9.46□□□□□ -0.89
ALMS1Q8TCU4 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC9.46□□□□□ -0.89
ALMS1Q8TCU4 SOX2-OT-203ENST00000466034 926 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
ALMS1Q8TCU4 EFNA5-204ENST00000509503 637 ntTSL 5 BASIC9.46□□□□□ -0.89
ALMS1Q8TCU4 AC100858.1-201ENST00000514059 1228 ntBASIC9.46□□□□□ -0.89
ALMS1Q8TCU4 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC9.46□□□□□ -0.89
ALMS1Q8TCU4 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC9.46□□□□□ -0.89
ALMS1Q8TCU4 SOX2-OT-221ENST00000594942 675 ntTSL 5 BASIC9.46□□□□□ -0.89
ALMS1Q8TCU4 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
ALMS1Q8TCU4 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
ALMS1Q8TCU4 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC9.46□□□□□ -0.89
ALMS1Q8TCU4 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
ALMS1Q8TCU4 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
ALMS1Q8TCU4 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC9.46□□□□□ -0.89
ALMS1Q8TCU4 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC9.46□□□□□ -0.89
ALMS1Q8TCU4 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC9.46□□□□□ -0.89
ALMS1Q8TCU4 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.89
ALMS1Q8TCU4 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
ALMS1Q8TCU4 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
ALMS1Q8TCU4 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC9.46□□□□□ -0.89
ALMS1Q8TCU4 SPTLC1P3-201ENST00000403408 259 ntBASIC9.46□□□□□ -0.89
ALMS1Q8TCU4 HNRNPABP1-201ENST00000406003 734 ntBASIC9.46□□□□□ -0.89
ALMS1Q8TCU4 AL353653.1-201ENST00000452336 638 ntTSL 2 BASIC9.46□□□□□ -0.89
ALMS1Q8TCU4 AP000533.1-201ENST00000456143 1177 ntBASIC9.46□□□□□ -0.89
ALMS1Q8TCU4 RN7SL672P-201ENST00000474091 317 ntBASIC9.46□□□□□ -0.89
ALMS1Q8TCU4 DDX11L8-201ENST00000535849 366 ntBASIC9.46□□□□□ -0.89
ALMS1Q8TCU4 CCDC32-215ENST00000625629 801 ntTSL 5 BASIC9.46□□□□□ -0.89
ALMS1Q8TCU4 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
ALMS1Q8TCU4 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
ALMS1Q8TCU4 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
ALMS1Q8TCU4 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
ALMS1Q8TCU4 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
ALMS1Q8TCU4 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.9
ALMS1Q8TCU4 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
ALMS1Q8TCU4 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
ALMS1Q8TCU4 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
ALMS1Q8TCU4 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.9
ALMS1Q8TCU4 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC9.46□□□□□ -0.9
ALMS1Q8TCU4 OR2W2P-201ENST00000406313 909 ntBASIC9.46□□□□□ -0.9
ALMS1Q8TCU4 AC026884.1-201ENST00000418296 457 ntBASIC9.46□□□□□ -0.9
ALMS1Q8TCU4 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC9.46□□□□□ -0.9
ALMS1Q8TCU4 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC9.46□□□□□ -0.9
ALMS1Q8TCU4 AC048380.1-201ENST00000589818 465 ntTSL 3 BASIC9.46□□□□□ -0.9
ALMS1Q8TCU4 AL590556.2-202ENST00000636906 844 ntBASIC9.46□□□□□ -0.9
ALMS1Q8TCU4 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC9.46□□□□□ -0.9
ALMS1Q8TCU4 AP003680.1-201ENST00000598970 3660 ntBASIC9.46□□□□□ -0.9
ALMS1Q8TCU4 AC007950.2-201ENST00000615045 2347 ntBASIC9.46□□□□□ -0.9
ALMS1Q8TCU4 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC9.46□□□□□ -0.9
ALMS1Q8TCU4 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
ALMS1Q8TCU4 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC9.46□□□□□ -0.9
ALMS1Q8TCU4 USP39-220ENST00000613444 2161 ntTSL 2 BASIC9.46□□□□□ -0.9
ALMS1Q8TCU4 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC9.46□□□□□ -0.9
ALMS1Q8TCU4 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC9.46□□□□□ -0.9
ALMS1Q8TCU4 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC9.46□□□□□ -0.9
ALMS1Q8TCU4 TMBIM7P-203ENST00000641617 1718 ntBASIC9.46□□□□□ -0.9
ALMS1Q8TCU4 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.9
ALMS1Q8TCU4 TEX33-203ENST00000405091 1149 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
ALMS1Q8TCU4 C3orf84-201ENST00000432035 669 ntAPPRIS ALT1 TSL 5 BASIC9.45□□□□□ -0.9
ALMS1Q8TCU4 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC9.45□□□□□ -0.9
ALMS1Q8TCU4 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC9.45□□□□□ -0.9
ALMS1Q8TCU4 MIR4326-201ENST00000582203 59 ntBASIC9.45□□□□□ -0.9
ALMS1Q8TCU4 MEP1AP1-201ENST00000636082 1097 ntBASIC9.45□□□□□ -0.9
ALMS1Q8TCU4 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
ALMS1Q8TCU4 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC9.45□□□□□ -0.9
ALMS1Q8TCU4 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
ALMS1Q8TCU4 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
ALMS1Q8TCU4 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC9.45□□□□□ -0.9
ALMS1Q8TCU4 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
ALMS1Q8TCU4 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC9.45□□□□□ -0.9
ALMS1Q8TCU4 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC9.45□□□□□ -0.9
ALMS1Q8TCU4 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC9.45□□□□□ -0.9
ALMS1Q8TCU4 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC9.45□□□□□ -0.9
ALMS1Q8TCU4 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
ALMS1Q8TCU4 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
ALMS1Q8TCU4 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
ALMS1Q8TCU4 THAP4-203ENST00000402545 833 ntTSL 5 BASIC9.45□□□□□ -0.9
ALMS1Q8TCU4 MYL6-215ENST00000549566 685 ntTSL 2 BASIC9.45□□□□□ -0.9
ALMS1Q8TCU4 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC9.45□□□□□ -0.9
ALMS1Q8TCU4 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
ALMS1Q8TCU4 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
ALMS1Q8TCU4 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC9.45□□□□□ -0.9
ALMS1Q8TCU4 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC9.45□□□□□ -0.9
ALMS1Q8TCU4 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC9.45□□□□□ -0.9
ALMS1Q8TCU4 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC9.45□□□□□ -0.9
ALMS1Q8TCU4 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC9.45□□□□□ -0.9
ALMS1Q8TCU4 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
ALMS1Q8TCU4 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC9.45□□□□□ -0.9
ALMS1Q8TCU4 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC9.45□□□□□ -0.9
ALMS1Q8TCU4 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
ALMS1Q8TCU4 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
ALMS1Q8TCU4 FTH1P18-201ENST00000412071 549 ntBASIC9.45□□□□□ -0.9
ALMS1Q8TCU4 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC9.45□□□□□ -0.9
ALMS1Q8TCU4 DNM1P46-202ENST00000415963 882 ntBASIC9.45□□□□□ -0.9
ALMS1Q8TCU4 AC092810.2-201ENST00000431570 362 ntBASIC9.45□□□□□ -0.9
ALMS1Q8TCU4 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC9.45□□□□□ -0.9
ALMS1Q8TCU4 AL359182.1-201ENST00000435915 469 ntTSL 3 BASIC9.45□□□□□ -0.9
ALMS1Q8TCU4 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
ALMS1Q8TCU4 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC9.45□□□□□ -0.9
ALMS1Q8TCU4 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC9.45□□□□□ -0.9
ALMS1Q8TCU4 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms