Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
USH1GQ495M9 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
USH1GQ495M9 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
USH1GQ495M9 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC16.74■□□□□ 0.27
USH1GQ495M9 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC16.74■□□□□ 0.27
USH1GQ495M9 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.74■□□□□ 0.27
USH1GQ495M9 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
USH1GQ495M9 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
USH1GQ495M9 AL136379.1-201ENST00000623471 2642 ntBASIC16.74■□□□□ 0.27
USH1GQ495M9 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
USH1GQ495M9 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
USH1GQ495M9 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
USH1GQ495M9 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
USH1GQ495M9 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
USH1GQ495M9 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
USH1GQ495M9 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
USH1GQ495M9 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC16.74■□□□□ 0.27
USH1GQ495M9 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
USH1GQ495M9 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
USH1GQ495M9 AC239868.1-201ENST00000369385 493 ntBASIC16.74■□□□□ 0.27
USH1GQ495M9 FES-203ENST00000394302 2133 ntTSL 5 BASIC16.74■□□□□ 0.27
USH1GQ495M9 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC16.74■□□□□ 0.27
USH1GQ495M9 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC16.74■□□□□ 0.27
USH1GQ495M9 AC007274.2-201ENST00000421675 662 ntBASIC16.74■□□□□ 0.27
USH1GQ495M9 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC16.74■□□□□ 0.27
USH1GQ495M9 AC006335.1-201ENST00000445200 547 ntBASIC16.74■□□□□ 0.27
USH1GQ495M9 MYADML-201ENST00000474610 2147 ntBASIC16.74■□□□□ 0.27
USH1GQ495M9 SUPT4H1P2-201ENST00000501248 353 ntBASIC16.74■□□□□ 0.27
USH1GQ495M9 AC116345.2-201ENST00000512837 523 ntBASIC16.74■□□□□ 0.27
USH1GQ495M9 RTN3P1-201ENST00000536295 711 ntBASIC16.74■□□□□ 0.27
USH1GQ495M9 AC003686.1-201ENST00000550956 1034 ntBASIC16.74■□□□□ 0.27
USH1GQ495M9 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
USH1GQ495M9 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC16.74■□□□□ 0.27
USH1GQ495M9 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC16.74■□□□□ 0.27
USH1GQ495M9 NAT9-211ENST00000580632 799 ntTSL 3 BASIC16.74■□□□□ 0.27
USH1GQ495M9 IRF3-215ENST00000596822 823 ntTSL 3 BASIC16.74■□□□□ 0.27
USH1GQ495M9 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
USH1GQ495M9 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
USH1GQ495M9 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC16.74■□□□□ 0.27
USH1GQ495M9 CDK7-214ENST00000626796 358 ntTSL 5 BASIC16.74■□□□□ 0.27
USH1GQ495M9 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC16.74■□□□□ 0.27
USH1GQ495M9 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC16.74■□□□□ 0.27
USH1GQ495M9 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
USH1GQ495M9 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
USH1GQ495M9 AGGF1P1-201ENST00000509500 2073 ntBASIC16.74■□□□□ 0.27
USH1GQ495M9 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
USH1GQ495M9 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.74■□□□□ 0.27
USH1GQ495M9 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
USH1GQ495M9 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
USH1GQ495M9 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
USH1GQ495M9 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
USH1GQ495M9 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
USH1GQ495M9 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC16.73■□□□□ 0.27
USH1GQ495M9 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
USH1GQ495M9 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
USH1GQ495M9 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
USH1GQ495M9 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC16.73■□□□□ 0.27
USH1GQ495M9 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
USH1GQ495M9 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
USH1GQ495M9 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
USH1GQ495M9 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
USH1GQ495M9 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
USH1GQ495M9 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
USH1GQ495M9 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
USH1GQ495M9 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC16.73■□□□□ 0.27
USH1GQ495M9 AC023824.1-201ENST00000562945 2975 ntBASIC16.73■□□□□ 0.27
USH1GQ495M9 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
USH1GQ495M9 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
USH1GQ495M9 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC16.73■□□□□ 0.27
USH1GQ495M9 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
USH1GQ495M9 AC106881.1-201ENST00000605849 3329 ntBASIC16.73■□□□□ 0.27
USH1GQ495M9 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
USH1GQ495M9 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
USH1GQ495M9 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
USH1GQ495M9 NCR3-202ENST00000376071 541 ntTSL 5 BASIC16.73■□□□□ 0.27
USH1GQ495M9 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
USH1GQ495M9 HLA-DQB2-229ENST00000411527 1059 ntBASIC16.73■□□□□ 0.27
USH1GQ495M9 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
USH1GQ495M9 GAS5-209ENST00000430245 723 ntTSL 3 BASIC16.73■□□□□ 0.27
USH1GQ495M9 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC16.73■□□□□ 0.27
USH1GQ495M9 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC16.73■□□□□ 0.27
USH1GQ495M9 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC16.73■□□□□ 0.27
USH1GQ495M9 AC022447.6-201ENST00000515522 438 ntBASIC16.73■□□□□ 0.27
USH1GQ495M9 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
USH1GQ495M9 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
USH1GQ495M9 PGAM1P5-201ENST00000548011 764 ntBASIC16.73■□□□□ 0.27
USH1GQ495M9 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC16.73■□□□□ 0.27
USH1GQ495M9 AC079328.1-201ENST00000560358 952 ntBASIC16.73■□□□□ 0.27
USH1GQ495M9 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
USH1GQ495M9 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC16.73■□□□□ 0.27
USH1GQ495M9 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC16.73■□□□□ 0.27
USH1GQ495M9 AL133499.1-201ENST00000596207 608 ntBASIC16.73■□□□□ 0.27
USH1GQ495M9 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC16.73■□□□□ 0.27
USH1GQ495M9 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
USH1GQ495M9 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
USH1GQ495M9 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
USH1GQ495M9 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
USH1GQ495M9 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC16.73■□□□□ 0.27
USH1GQ495M9 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
USH1GQ495M9 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms