Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
RPS3AP61247 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPS3AP61247 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RPS3AP61247 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.84□□□□□ -0.19
RPS3AP61247 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
RPS3AP61247 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPS3AP61247 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPS3AP61247 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RPS3AP61247 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.84□□□□□ -0.19
RPS3AP61247 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.84□□□□□ -0.19
RPS3AP61247 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC13.84□□□□□ -0.19
RPS3AP61247 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.84□□□□□ -0.19
RPS3AP61247 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
RPS3AP61247 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.84□□□□□ -0.19
RPS3AP61247 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.84□□□□□ -0.19
RPS3AP61247 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPS3AP61247 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
RPS3AP61247 ACKR1-201ENST00000368121 1240 ntBASIC13.84□□□□□ -0.19
RPS3AP61247 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.84□□□□□ -0.19
RPS3AP61247 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RPS3AP61247 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.84□□□□□ -0.19
RPS3AP61247 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
RPS3AP61247 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
RPS3AP61247 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.84□□□□□ -0.19
RPS3AP61247 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.84□□□□□ -0.19
RPS3AP61247 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
RPS3AP61247 AL022328.1-201ENST00000610050 478 ntBASIC13.84□□□□□ -0.19
RPS3AP61247 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPS3AP61247 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.84□□□□□ -0.19
RPS3AP61247 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
RPS3AP61247 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPS3AP61247 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
RPS3AP61247 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPS3AP61247 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
RPS3AP61247 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPS3AP61247 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
RPS3AP61247 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
RPS3AP61247 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
RPS3AP61247 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.19
RPS3AP61247 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
RPS3AP61247 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.83□□□□□ -0.19
RPS3AP61247 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.83□□□□□ -0.2
RPS3AP61247 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.83□□□□□ -0.2
RPS3AP61247 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPS3AP61247 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC13.83□□□□□ -0.2
RPS3AP61247 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
RPS3AP61247 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPS3AP61247 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.83□□□□□ -0.2
RPS3AP61247 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RPS3AP61247 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RPS3AP61247 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC13.83□□□□□ -0.2
RPS3AP61247 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RPS3AP61247 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPS3AP61247 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPS3AP61247 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RPS3AP61247 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPS3AP61247 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPS3AP61247 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
RPS3AP61247 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
RPS3AP61247 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RPS3AP61247 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.83□□□□□ -0.2
RPS3AP61247 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.83□□□□□ -0.2
RPS3AP61247 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.83□□□□□ -0.2
RPS3AP61247 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.83□□□□□ -0.2
RPS3AP61247 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.83□□□□□ -0.2
RPS3AP61247 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.83□□□□□ -0.2
RPS3AP61247 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC13.83□□□□□ -0.2
RPS3AP61247 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RPS3AP61247 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
RPS3AP61247 AC068587.3-201ENST00000526613 355 ntBASIC13.83□□□□□ -0.2
RPS3AP61247 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RPS3AP61247 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.83□□□□□ -0.2
RPS3AP61247 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.83□□□□□ -0.2
RPS3AP61247 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.83□□□□□ -0.2
RPS3AP61247 AC106886.1-201ENST00000568660 600 ntBASIC13.83□□□□□ -0.2
RPS3AP61247 MIR5189-201ENST00000577370 114 ntBASIC13.83□□□□□ -0.2
RPS3AP61247 AC233724.13-201ENST00000598383 410 ntBASIC13.83□□□□□ -0.2
RPS3AP61247 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.83□□□□□ -0.2
RPS3AP61247 AL162274.1-201ENST00000617191 1098 ntBASIC13.83□□□□□ -0.2
RPS3AP61247 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RPS3AP61247 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
RPS3AP61247 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC13.83□□□□□ -0.2
RPS3AP61247 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPS3AP61247 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.83□□□□□ -0.2
RPS3AP61247 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPS3AP61247 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
RPS3AP61247 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
RPS3AP61247 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPS3AP61247 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPS3AP61247 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPS3AP61247 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPS3AP61247 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RPS3AP61247 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.83□□□□□ -0.2
RPS3AP61247 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RPS3AP61247 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RPS3AP61247 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
RPS3AP61247 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.83□□□□□ -0.2
RPS3AP61247 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RPS3AP61247 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.83□□□□□ -0.2
RPS3AP61247 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms