Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 AC004890.2-204ENST00000481968 304 ntBASIC13.33□□□□□ -0.28
HMGN1P05114 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HMGN1P05114 GCOM2-201ENST00000509133 1104 ntBASIC13.33□□□□□ -0.28
HMGN1P05114 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.33□□□□□ -0.28
HMGN1P05114 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.33□□□□□ -0.28
HMGN1P05114 SORD2P-201ENST00000558556 1069 ntBASIC13.33□□□□□ -0.28
HMGN1P05114 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
HMGN1P05114 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.33□□□□□ -0.28
HMGN1P05114 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.33□□□□□ -0.28
HMGN1P05114 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.33□□□□□ -0.28
HMGN1P05114 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.33□□□□□ -0.28
HMGN1P05114 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.33□□□□□ -0.28
HMGN1P05114 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HMGN1P05114 AL390754.1-201ENST00000619088 582 ntBASIC13.33□□□□□ -0.28
HMGN1P05114 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
HMGN1P05114 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HMGN1P05114 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HMGN1P05114 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
HMGN1P05114 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
HMGN1P05114 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HMGN1P05114 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HMGN1P05114 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HMGN1P05114 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HMGN1P05114 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
HMGN1P05114 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
HMGN1P05114 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
HMGN1P05114 AC073548.1-201ENST00000624088 1882 ntBASIC13.33□□□□□ -0.28
HMGN1P05114 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.33□□□□□ -0.28
HMGN1P05114 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HMGN1P05114 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HMGN1P05114 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.33□□□□□ -0.28
HMGN1P05114 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HMGN1P05114 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
HMGN1P05114 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HMGN1P05114 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.33□□□□□ -0.28
HMGN1P05114 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
HMGN1P05114 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.33□□□□□ -0.28
HMGN1P05114 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
HMGN1P05114 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.33□□□□□ -0.28
HMGN1P05114 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
HMGN1P05114 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HMGN1P05114 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HMGN1P05114 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HMGN1P05114 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HMGN1P05114 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HMGN1P05114 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
HMGN1P05114 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.32□□□□□ -0.28
HMGN1P05114 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.32□□□□□ -0.28
HMGN1P05114 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
HMGN1P05114 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HMGN1P05114 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HMGN1P05114 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.32□□□□□ -0.28
HMGN1P05114 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.32□□□□□ -0.28
HMGN1P05114 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
HMGN1P05114 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
HMGN1P05114 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HMGN1P05114 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.32□□□□□ -0.28
HMGN1P05114 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.32□□□□□ -0.28
HMGN1P05114 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.32□□□□□ -0.28
HMGN1P05114 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HMGN1P05114 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HMGN1P05114 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HMGN1P05114 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HMGN1P05114 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.32□□□□□ -0.28
HMGN1P05114 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HMGN1P05114 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HMGN1P05114 SPDYE19P-201ENST00000338590 713 ntBASIC13.32□□□□□ -0.28
HMGN1P05114 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HMGN1P05114 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
HMGN1P05114 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HMGN1P05114 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HMGN1P05114 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.32□□□□□ -0.28
HMGN1P05114 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.32□□□□□ -0.28
HMGN1P05114 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC13.32□□□□□ -0.28
HMGN1P05114 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HMGN1P05114 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.32□□□□□ -0.28
HMGN1P05114 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.32□□□□□ -0.28
HMGN1P05114 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HMGN1P05114 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.32□□□□□ -0.28
HMGN1P05114 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.32□□□□□ -0.28
HMGN1P05114 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.32□□□□□ -0.28
HMGN1P05114 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.32□□□□□ -0.28
HMGN1P05114 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.32□□□□□ -0.28
HMGN1P05114 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
HMGN1P05114 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.32□□□□□ -0.28
HMGN1P05114 AC093028.1-201ENST00000622998 982 ntBASIC13.32□□□□□ -0.28
HMGN1P05114 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.32□□□□□ -0.28
HMGN1P05114 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
HMGN1P05114 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.32□□□□□ -0.28
HMGN1P05114 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.32□□□□□ -0.28
HMGN1P05114 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HMGN1P05114 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.32□□□□□ -0.28
HMGN1P05114 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.32□□□□□ -0.28
HMGN1P05114 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.32□□□□□ -0.28
HMGN1P05114 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HMGN1P05114 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HMGN1P05114 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
HMGN1P05114 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMGN1P05114 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMGN1P05114 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms