Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SIX3O95343 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SIX3O95343 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SIX3O95343 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SIX3O95343 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.33□□□□□ -0.12
SIX3O95343 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
SIX3O95343 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SIX3O95343 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SIX3O95343 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SIX3O95343 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.33□□□□□ -0.12
SIX3O95343 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SIX3O95343 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SIX3O95343 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
SIX3O95343 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SIX3O95343 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SIX3O95343 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.33□□□□□ -0.12
SIX3O95343 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SIX3O95343 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SIX3O95343 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
SIX3O95343 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SIX3O95343 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SIX3O95343 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SIX3O95343 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.32□□□□□ -0.12
SIX3O95343 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SIX3O95343 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SIX3O95343 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.32□□□□□ -0.12
SIX3O95343 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SIX3O95343 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SIX3O95343 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SIX3O95343 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SIX3O95343 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SIX3O95343 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.32□□□□□ -0.12
SIX3O95343 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.32□□□□□ -0.12
SIX3O95343 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SIX3O95343 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SIX3O95343 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SIX3O95343 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SIX3O95343 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SIX3O95343 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
SIX3O95343 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.32□□□□□ -0.12
SIX3O95343 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SIX3O95343 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SIX3O95343 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.32□□□□□ -0.12
SIX3O95343 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SIX3O95343 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.32□□□□□ -0.12
SIX3O95343 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SIX3O95343 BCRP2-202ENST00000447763 634 ntBASIC14.32□□□□□ -0.12
SIX3O95343 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SIX3O95343 RN7SL752P-201ENST00000463779 287 ntBASIC14.32□□□□□ -0.12
SIX3O95343 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.32□□□□□ -0.12
SIX3O95343 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SIX3O95343 BCRP6-201ENST00000510112 632 ntBASIC14.32□□□□□ -0.12
SIX3O95343 BCRP7-201ENST00000511549 544 ntBASIC14.32□□□□□ -0.12
SIX3O95343 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
SIX3O95343 MIR4683-201ENST00000579659 81 ntBASIC14.32□□□□□ -0.12
SIX3O95343 OR10B1P-201ENST00000601666 907 ntBASIC14.32□□□□□ -0.12
SIX3O95343 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.32□□□□□ -0.12
SIX3O95343 AC132938.4-201ENST00000623835 848 ntBASIC14.32□□□□□ -0.12
SIX3O95343 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SIX3O95343 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SIX3O95343 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SIX3O95343 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SIX3O95343 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SIX3O95343 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SIX3O95343 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SIX3O95343 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SIX3O95343 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
SIX3O95343 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SIX3O95343 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SIX3O95343 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SIX3O95343 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.32□□□□□ -0.12
SIX3O95343 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
SIX3O95343 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SIX3O95343 KRT8P28-201ENST00000433288 1390 ntBASIC14.32□□□□□ -0.12
SIX3O95343 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SIX3O95343 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SIX3O95343 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.32□□□□□ -0.12
SIX3O95343 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SIX3O95343 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SIX3O95343 AC023794.5-201ENST00000564380 2157 ntBASIC14.32□□□□□ -0.12
SIX3O95343 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.31□□□□□ -0.12
SIX3O95343 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SIX3O95343 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SIX3O95343 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SIX3O95343 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SIX3O95343 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SIX3O95343 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SIX3O95343 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SIX3O95343 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.31□□□□□ -0.12
SIX3O95343 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SIX3O95343 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SIX3O95343 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.31□□□□□ -0.12
SIX3O95343 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.31□□□□□ -0.12
SIX3O95343 AC092933.1-201ENST00000393644 945 ntBASIC14.31□□□□□ -0.12
SIX3O95343 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.31□□□□□ -0.12
SIX3O95343 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SIX3O95343 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.31□□□□□ -0.12
SIX3O95343 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SIX3O95343 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
SIX3O95343 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms