Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
NACAE9PAV3 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NACAE9PAV3 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NACAE9PAV3 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NACAE9PAV3 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NACAE9PAV3 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NACAE9PAV3 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC10.83□□□□□ -0.68
NACAE9PAV3 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC10.83□□□□□ -0.68
NACAE9PAV3 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
NACAE9PAV3 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC10.83□□□□□ -0.68
NACAE9PAV3 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
NACAE9PAV3 SCN5A-202ENST00000333535 8456 ntAPPRIS P5 TSL 1 (best) BASIC10.83□□□□□ -0.68
NACAE9PAV3 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
NACAE9PAV3 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
NACAE9PAV3 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NACAE9PAV3 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
NACAE9PAV3 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
NACAE9PAV3 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NACAE9PAV3 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
NACAE9PAV3 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NACAE9PAV3 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NACAE9PAV3 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC10.83□□□□□ -0.68
NACAE9PAV3 GOLGA3-202ENST00000450791 8870 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
NACAE9PAV3 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
NACAE9PAV3 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC10.83□□□□□ -0.68
NACAE9PAV3 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NACAE9PAV3 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
NACAE9PAV3 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
NACAE9PAV3 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NACAE9PAV3 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NACAE9PAV3 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC10.83□□□□□ -0.68
NACAE9PAV3 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC10.83□□□□□ -0.68
NACAE9PAV3 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC10.83□□□□□ -0.68
NACAE9PAV3 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC10.83□□□□□ -0.68
NACAE9PAV3 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NACAE9PAV3 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC10.83□□□□□ -0.68
NACAE9PAV3 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC10.83□□□□□ -0.68
NACAE9PAV3 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC10.83□□□□□ -0.68
NACAE9PAV3 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC10.83□□□□□ -0.68
NACAE9PAV3 AC093813.1-201ENST00000605066 256 ntBASIC10.83□□□□□ -0.68
NACAE9PAV3 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NACAE9PAV3 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NACAE9PAV3 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
NACAE9PAV3 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC10.83□□□□□ -0.68
NACAE9PAV3 AC018665.1-201ENST00000622927 1362 ntBASIC10.83□□□□□ -0.68
NACAE9PAV3 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
NACAE9PAV3 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NACAE9PAV3 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC10.83□□□□□ -0.68
NACAE9PAV3 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC10.82□□□□□ -0.68
NACAE9PAV3 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC10.82□□□□□ -0.68
NACAE9PAV3 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC10.82□□□□□ -0.68
NACAE9PAV3 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NACAE9PAV3 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NACAE9PAV3 OPA3-201ENST00000263275 7828 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
NACAE9PAV3 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
NACAE9PAV3 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
NACAE9PAV3 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC10.82□□□□□ -0.68
NACAE9PAV3 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
NACAE9PAV3 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
NACAE9PAV3 MX1-218ENST00000619682 1980 ntTSL 5 BASIC10.82□□□□□ -0.68
NACAE9PAV3 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC10.82□□□□□ -0.68
NACAE9PAV3 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
NACAE9PAV3 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC10.82□□□□□ -0.68
NACAE9PAV3 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
NACAE9PAV3 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
NACAE9PAV3 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
NACAE9PAV3 MEP1AP4-201ENST00000423244 1087 ntBASIC10.82□□□□□ -0.68
NACAE9PAV3 AL442647.2-201ENST00000429864 857 ntBASIC10.82□□□□□ -0.68
NACAE9PAV3 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC10.82□□□□□ -0.68
NACAE9PAV3 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC10.82□□□□□ -0.68
NACAE9PAV3 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC10.82□□□□□ -0.68
NACAE9PAV3 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC10.82□□□□□ -0.68
NACAE9PAV3 VDAC1P7-201ENST00000462417 847 ntBASIC10.82□□□□□ -0.68
NACAE9PAV3 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC10.82□□□□□ -0.68
NACAE9PAV3 AC104596.2-201ENST00000512793 793 ntBASIC10.82□□□□□ -0.68
NACAE9PAV3 AC026410.3-201ENST00000514280 936 ntBASIC10.82□□□□□ -0.68
NACAE9PAV3 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC10.82□□□□□ -0.68
NACAE9PAV3 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC10.82□□□□□ -0.68
NACAE9PAV3 TNN-202ENST00000621086 4234 ntTSL 5 BASIC10.82□□□□□ -0.68
NACAE9PAV3 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
NACAE9PAV3 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC10.82□□□□□ -0.68
NACAE9PAV3 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
NACAE9PAV3 PDIA3P1-201ENST00000471856 1510 ntBASIC10.82□□□□□ -0.68
NACAE9PAV3 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
NACAE9PAV3 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
NACAE9PAV3 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC10.82□□□□□ -0.68
NACAE9PAV3 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NACAE9PAV3 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NACAE9PAV3 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
NACAE9PAV3 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC10.82□□□□□ -0.68
NACAE9PAV3 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC10.82□□□□□ -0.68
NACAE9PAV3 R3HDM2P2-201ENST00000401880 2116 ntBASIC10.82□□□□□ -0.68
NACAE9PAV3 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NACAE9PAV3 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC10.82□□□□□ -0.68
NACAE9PAV3 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NACAE9PAV3 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
NACAE9PAV3 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
NACAE9PAV3 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NACAE9PAV3 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
NACAE9PAV3 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms