Protein–RNA interactions for Protein: Q9UBF6

RNF7, RING-box protein 2, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7Q9UBF6 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
RNF7Q9UBF6 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RNF7Q9UBF6 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC12.36□□□□□ -0.43
RNF7Q9UBF6 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RNF7Q9UBF6 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RNF7Q9UBF6 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
RNF7Q9UBF6 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RNF7Q9UBF6 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RNF7Q9UBF6 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC12.36□□□□□ -0.43
RNF7Q9UBF6 RPS3-201ENST00000278572 907 ntTSL 3 BASIC12.36□□□□□ -0.43
RNF7Q9UBF6 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RNF7Q9UBF6 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC12.36□□□□□ -0.43
RNF7Q9UBF6 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
RNF7Q9UBF6 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RNF7Q9UBF6 MIR663B-201ENST00000408361 115 ntBASIC12.36□□□□□ -0.43
RNF7Q9UBF6 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC12.36□□□□□ -0.43
RNF7Q9UBF6 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.36□□□□□ -0.43
RNF7Q9UBF6 HNRNPA1P63-201ENST00000427917 963 ntBASIC12.36□□□□□ -0.43
RNF7Q9UBF6 POM121L10P-201ENST00000436994 1285 ntBASIC12.36□□□□□ -0.43
RNF7Q9UBF6 TUBB8P8-201ENST00000458717 1058 ntBASIC12.36□□□□□ -0.43
RNF7Q9UBF6 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC12.36□□□□□ -0.43
RNF7Q9UBF6 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC12.36□□□□□ -0.43
RNF7Q9UBF6 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.36□□□□□ -0.43
RNF7Q9UBF6 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC12.36□□□□□ -0.43
RNF7Q9UBF6 RN7SL219P-201ENST00000582872 296 ntBASIC12.36□□□□□ -0.43
RNF7Q9UBF6 AL096828.3-201ENST00000615354 462 ntBASIC12.36□□□□□ -0.43
RNF7Q9UBF6 AL023803.2-201ENST00000620080 638 ntBASIC12.36□□□□□ -0.43
RNF7Q9UBF6 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RNF7Q9UBF6 AL162426.1-201ENST00000624141 743 ntBASIC12.36□□□□□ -0.43
RNF7Q9UBF6 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RNF7Q9UBF6 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.36□□□□□ -0.43
RNF7Q9UBF6 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.36□□□□□ -0.43
RNF7Q9UBF6 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC12.36□□□□□ -0.43
RNF7Q9UBF6 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RNF7Q9UBF6 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
RNF7Q9UBF6 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RNF7Q9UBF6 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RNF7Q9UBF6 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RNF7Q9UBF6 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RNF7Q9UBF6 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RNF7Q9UBF6 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
RNF7Q9UBF6 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RNF7Q9UBF6 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RNF7Q9UBF6 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RNF7Q9UBF6 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC12.36□□□□□ -0.43
RNF7Q9UBF6 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RNF7Q9UBF6 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RNF7Q9UBF6 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RNF7Q9UBF6 AC244394.1-201ENST00000435000 1665 ntBASIC12.35□□□□□ -0.43
RNF7Q9UBF6 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
RNF7Q9UBF6 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RNF7Q9UBF6 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RNF7Q9UBF6 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.35□□□□□ -0.43
RNF7Q9UBF6 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.35□□□□□ -0.43
RNF7Q9UBF6 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
RNF7Q9UBF6 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC12.35□□□□□ -0.43
RNF7Q9UBF6 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC12.35□□□□□ -0.43
RNF7Q9UBF6 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.35□□□□□ -0.43
RNF7Q9UBF6 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC12.35□□□□□ -0.43
RNF7Q9UBF6 AC215219.1-201ENST00000400706 1817 ntBASIC12.35□□□□□ -0.43
RNF7Q9UBF6 KRT8P29-201ENST00000420409 1371 ntBASIC12.35□□□□□ -0.43
RNF7Q9UBF6 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RNF7Q9UBF6 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RNF7Q9UBF6 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
RNF7Q9UBF6 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RNF7Q9UBF6 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RNF7Q9UBF6 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
RNF7Q9UBF6 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RNF7Q9UBF6 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RNF7Q9UBF6 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RNF7Q9UBF6 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC12.35□□□□□ -0.43
RNF7Q9UBF6 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
RNF7Q9UBF6 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RNF7Q9UBF6 AL591846.1-201ENST00000451736 433 ntBASIC12.35□□□□□ -0.43
RNF7Q9UBF6 APOA2-204ENST00000464492 530 ntTSL 3 BASIC12.35□□□□□ -0.43
RNF7Q9UBF6 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RNF7Q9UBF6 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC12.35□□□□□ -0.43
RNF7Q9UBF6 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RNF7Q9UBF6 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC12.35□□□□□ -0.43
RNF7Q9UBF6 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC12.35□□□□□ -0.43
RNF7Q9UBF6 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC12.35□□□□□ -0.43
RNF7Q9UBF6 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC12.35□□□□□ -0.43
RNF7Q9UBF6 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC12.35□□□□□ -0.43
RNF7Q9UBF6 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC12.35□□□□□ -0.43
RNF7Q9UBF6 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RNF7Q9UBF6 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RNF7Q9UBF6 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
RNF7Q9UBF6 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC12.35□□□□□ -0.43
RNF7Q9UBF6 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
RNF7Q9UBF6 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
RNF7Q9UBF6 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
RNF7Q9UBF6 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RNF7Q9UBF6 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RNF7Q9UBF6 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
RNF7Q9UBF6 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RNF7Q9UBF6 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
RNF7Q9UBF6 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
RNF7Q9UBF6 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RNF7Q9UBF6 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC12.35□□□□□ -0.43
RNF7Q9UBF6 REXO1L6P-201ENST00000603433 1515 ntBASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms