Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLCF1Q9UBD9 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
CLCF1Q9UBD9 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
CLCF1Q9UBD9 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLCF1Q9UBD9 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CLCF1Q9UBD9 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLCF1Q9UBD9 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLCF1Q9UBD9 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLCF1Q9UBD9 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13□□□□□ -0.33
CLCF1Q9UBD9 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13□□□□□ -0.33
CLCF1Q9UBD9 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13□□□□□ -0.33
CLCF1Q9UBD9 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLCF1Q9UBD9 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13□□□□□ -0.33
CLCF1Q9UBD9 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13□□□□□ -0.33
CLCF1Q9UBD9 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLCF1Q9UBD9 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13□□□□□ -0.33
CLCF1Q9UBD9 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13□□□□□ -0.33
CLCF1Q9UBD9 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13□□□□□ -0.33
CLCF1Q9UBD9 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13□□□□□ -0.33
CLCF1Q9UBD9 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13□□□□□ -0.33
CLCF1Q9UBD9 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13□□□□□ -0.33
CLCF1Q9UBD9 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLCF1Q9UBD9 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLCF1Q9UBD9 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLCF1Q9UBD9 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLCF1Q9UBD9 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLCF1Q9UBD9 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC13□□□□□ -0.33
CLCF1Q9UBD9 AHCYP4-201ENST00000419201 1315 ntBASIC13□□□□□ -0.33
CLCF1Q9UBD9 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC13□□□□□ -0.33
CLCF1Q9UBD9 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLCF1Q9UBD9 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13□□□□□ -0.33
CLCF1Q9UBD9 PDIA3P2-201ENST00000428073 158 ntBASIC13□□□□□ -0.33
CLCF1Q9UBD9 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13□□□□□ -0.33
CLCF1Q9UBD9 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC13□□□□□ -0.33
CLCF1Q9UBD9 RN7SL769P-201ENST00000469386 295 ntBASIC13□□□□□ -0.33
CLCF1Q9UBD9 IMP3P2-201ENST00000489760 475 ntBASIC13□□□□□ -0.33
CLCF1Q9UBD9 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC13□□□□□ -0.33
CLCF1Q9UBD9 SUPT4H1P2-201ENST00000501248 353 ntBASIC13□□□□□ -0.33
CLCF1Q9UBD9 RNA5SP423-201ENST00000517127 109 ntBASIC13□□□□□ -0.33
CLCF1Q9UBD9 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13□□□□□ -0.33
CLCF1Q9UBD9 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC13□□□□□ -0.33
CLCF1Q9UBD9 AC003686.1-201ENST00000550956 1034 ntBASIC13□□□□□ -0.33
CLCF1Q9UBD9 AC027237.1-201ENST00000560942 655 ntBASIC13□□□□□ -0.33
CLCF1Q9UBD9 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC13□□□□□ -0.33
CLCF1Q9UBD9 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC13□□□□□ -0.33
CLCF1Q9UBD9 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLCF1Q9UBD9 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC13□□□□□ -0.33
CLCF1Q9UBD9 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLCF1Q9UBD9 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
CLCF1Q9UBD9 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
CLCF1Q9UBD9 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
CLCF1Q9UBD9 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLCF1Q9UBD9 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
CLCF1Q9UBD9 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLCF1Q9UBD9 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
CLCF1Q9UBD9 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13□□□□□ -0.33
CLCF1Q9UBD9 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLCF1Q9UBD9 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13□□□□□ -0.33
CLCF1Q9UBD9 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13□□□□□ -0.33
CLCF1Q9UBD9 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLCF1Q9UBD9 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 RAN-210ENST00000541630 1475 ntTSL 2 BASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 AC239868.1-201ENST00000369385 493 ntBASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 OR2R1P-201ENST00000441404 914 ntBASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 FGFR3P5-201ENST00000564496 886 ntBASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 AC092299.1-201ENST00000632679 757 ntBASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 AL354702.1-201ENST00000442006 1960 ntBASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 AC144831.1-201ENST00000573312 2656 ntBASIC12.99□□□□□ -0.33
CLCF1Q9UBD9 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms