Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 MSANTD2P1-201ENST00000445341 1368 ntBASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 MIR648-201ENST00000385046 94 ntBASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 MIR1226-201ENST00000408658 75 ntBASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 OR52M2P-201ENST00000414298 959 ntBASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 IFNWP2-201ENST00000431203 580 ntBASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 ZNF877P-201ENST00000437614 612 ntBASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 AC079414.2-201ENST00000567157 1104 ntBASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 AGGF1P1-201ENST00000509500 2073 ntBASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 LINC01101-201ENST00000622953 1884 ntBASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 AL136172.1-201ENST00000598590 1394 ntBASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 TNRC18P2-201ENST00000417666 2714 ntBASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 DUX4L50-201ENST00000455245 715 ntBASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 CRYAB-213ENST00000533475 1119 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 AC025186.1-201ENST00000478174 870 ntBASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 ABCC6P1-203ENST00000565566 1170 ntBASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 CHD2-218ENST00000629346 1249 ntTSL 5 BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 AC008494.1-201ENST00000497612 796 ntBASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 DLK1-205ENST00000556051 469 ntTSL 2 BASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 C17orf62-234ENST00000584503 584 ntTSL 2 BASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 AC016582.2-202ENST00000587765 1094 ntBASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 EMP3-204ENST00000596315 761 ntTSL 2 BASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 KRT8P28-201ENST00000433288 1390 ntBASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CSMD1Q96PZ7 CD3G-202ENST00000392883 1179 ntTSL 5 BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms