Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM71Q2Q1W2 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM71Q2Q1W2 AC018638.5-201ENST00000450885 754 ntBASIC15.79■□□□□ 0.12
TRIM71Q2Q1W2 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC15.79■□□□□ 0.12
TRIM71Q2Q1W2 AL157792.1-201ENST00000488281 530 ntBASIC15.79■□□□□ 0.12
TRIM71Q2Q1W2 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC15.79■□□□□ 0.12
TRIM71Q2Q1W2 AC140658.4-201ENST00000561990 352 ntBASIC15.79■□□□□ 0.12
TRIM71Q2Q1W2 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC15.79■□□□□ 0.12
TRIM71Q2Q1W2 AC021016.3-201ENST00000608367 477 ntBASIC15.79■□□□□ 0.12
TRIM71Q2Q1W2 AC138466.5-201ENST00000624002 808 ntBASIC15.79■□□□□ 0.12
TRIM71Q2Q1W2 LINC00431-202ENST00000636375 159 ntBASIC15.79■□□□□ 0.12
TRIM71Q2Q1W2 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM71Q2Q1W2 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.79■□□□□ 0.12
TRIM71Q2Q1W2 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TRIM71Q2Q1W2 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.79■□□□□ 0.12
TRIM71Q2Q1W2 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM71Q2Q1W2 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM71Q2Q1W2 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.79■□□□□ 0.12
TRIM71Q2Q1W2 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM71Q2Q1W2 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TRIM71Q2Q1W2 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM71Q2Q1W2 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM71Q2Q1W2 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM71Q2Q1W2 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM71Q2Q1W2 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TRIM71Q2Q1W2 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM71Q2Q1W2 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.79■□□□□ 0.12
TRIM71Q2Q1W2 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TRIM71Q2Q1W2 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC15.78■□□□□ 0.12
TRIM71Q2Q1W2 AC006372.4-201ENST00000624122 1543 ntBASIC15.78■□□□□ 0.12
TRIM71Q2Q1W2 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM71Q2Q1W2 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC15.78■□□□□ 0.12
TRIM71Q2Q1W2 LAP3P2-201ENST00000454686 1454 ntBASIC15.78■□□□□ 0.12
TRIM71Q2Q1W2 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM71Q2Q1W2 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM71Q2Q1W2 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.78■□□□□ 0.12
TRIM71Q2Q1W2 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM71Q2Q1W2 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM71Q2Q1W2 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM71Q2Q1W2 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
TRIM71Q2Q1W2 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC15.78■□□□□ 0.12
TRIM71Q2Q1W2 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
TRIM71Q2Q1W2 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM71Q2Q1W2 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC15.78■□□□□ 0.12
TRIM71Q2Q1W2 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC15.78■□□□□ 0.12
TRIM71Q2Q1W2 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM71Q2Q1W2 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM71Q2Q1W2 AC068867.1-201ENST00000559855 150 ntBASIC15.78■□□□□ 0.12
TRIM71Q2Q1W2 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM71Q2Q1W2 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC15.78■□□□□ 0.12
TRIM71Q2Q1W2 AP000322.3-201ENST00000608665 388 ntBASIC15.78■□□□□ 0.12
TRIM71Q2Q1W2 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM71Q2Q1W2 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM71Q2Q1W2 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.78■□□□□ 0.12
TRIM71Q2Q1W2 HYMAI-201ENST00000635591 3347 ntBASIC15.78■□□□□ 0.12
TRIM71Q2Q1W2 AGGF1P1-201ENST00000509500 2073 ntBASIC15.78■□□□□ 0.12
TRIM71Q2Q1W2 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM71Q2Q1W2 AGAP7P-201ENST00000582299 2062 ntBASIC15.78■□□□□ 0.12
TRIM71Q2Q1W2 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM71Q2Q1W2 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM71Q2Q1W2 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM71Q2Q1W2 AGAP14-201ENST00000624701 2060 ntBASIC15.78■□□□□ 0.12
TRIM71Q2Q1W2 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM71Q2Q1W2 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM71Q2Q1W2 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM71Q2Q1W2 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM71Q2Q1W2 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM71Q2Q1W2 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.78■□□□□ 0.12
TRIM71Q2Q1W2 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM71Q2Q1W2 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM71Q2Q1W2 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
TRIM71Q2Q1W2 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM71Q2Q1W2 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM71Q2Q1W2 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.78■□□□□ 0.12
TRIM71Q2Q1W2 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.78■□□□□ 0.12
TRIM71Q2Q1W2 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TRIM71Q2Q1W2 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.78■□□□□ 0.12
TRIM71Q2Q1W2 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM71Q2Q1W2 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM71Q2Q1W2 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
TRIM71Q2Q1W2 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC15.77■□□□□ 0.12
TRIM71Q2Q1W2 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
TRIM71Q2Q1W2 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM71Q2Q1W2 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.77■□□□□ 0.12
TRIM71Q2Q1W2 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
TRIM71Q2Q1W2 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
TRIM71Q2Q1W2 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM71Q2Q1W2 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
TRIM71Q2Q1W2 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM71Q2Q1W2 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM71Q2Q1W2 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM71Q2Q1W2 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM71Q2Q1W2 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC15.77■□□□□ 0.12
TRIM71Q2Q1W2 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM71Q2Q1W2 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM71Q2Q1W2 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM71Q2Q1W2 RN7SKP109-201ENST00000410592 316 ntBASIC15.77■□□□□ 0.12
TRIM71Q2Q1W2 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC15.77■□□□□ 0.12
TRIM71Q2Q1W2 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM71Q2Q1W2 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms