Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 AC022616.1-201ENST00000518688 554 ntBASIC13.46□□□□□ -0.25
CDC42P60953 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
CDC42P60953 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
CDC42P60953 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.46□□□□□ -0.25
CDC42P60953 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.46□□□□□ -0.25
CDC42P60953 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.46□□□□□ -0.25
CDC42P60953 AC044860.1-202ENST00000559481 777 ntBASIC13.46□□□□□ -0.25
CDC42P60953 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.46□□□□□ -0.25
CDC42P60953 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CDC42P60953 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC13.46□□□□□ -0.25
CDC42P60953 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.46□□□□□ -0.25
CDC42P60953 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.46□□□□□ -0.25
CDC42P60953 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.46□□□□□ -0.25
CDC42P60953 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CDC42P60953 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CDC42P60953 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CDC42P60953 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CDC42P60953 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.46□□□□□ -0.25
CDC42P60953 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.46□□□□□ -0.25
CDC42P60953 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CDC42P60953 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
CDC42P60953 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CDC42P60953 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CDC42P60953 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
CDC42P60953 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
CDC42P60953 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
CDC42P60953 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CDC42P60953 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CDC42P60953 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
CDC42P60953 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.46□□□□□ -0.26
CDC42P60953 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.46□□□□□ -0.26
CDC42P60953 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CDC42P60953 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC42P60953 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC42P60953 AC114271.1-201ENST00000612689 2813 ntBASIC13.45□□□□□ -0.26
CDC42P60953 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC42P60953 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.45□□□□□ -0.26
CDC42P60953 AC068760.1-201ENST00000493579 1953 ntBASIC13.45□□□□□ -0.26
CDC42P60953 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC42P60953 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.45□□□□□ -0.26
CDC42P60953 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.45□□□□□ -0.26
CDC42P60953 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.45□□□□□ -0.26
CDC42P60953 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC13.45□□□□□ -0.26
CDC42P60953 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC42P60953 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CDC42P60953 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.45□□□□□ -0.26
CDC42P60953 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
CDC42P60953 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.45□□□□□ -0.26
CDC42P60953 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC42P60953 SON-203ENST00000381679 7860 ntTSL 5 BASIC13.45□□□□□ -0.26
CDC42P60953 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CDC42P60953 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC42P60953 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC42P60953 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC42P60953 AL157996.1-201ENST00000624684 2299 ntBASIC13.45□□□□□ -0.26
CDC42P60953 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CDC42P60953 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
CDC42P60953 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.45□□□□□ -0.26
CDC42P60953 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.45□□□□□ -0.26
CDC42P60953 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
CDC42P60953 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CDC42P60953 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC42P60953 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CDC42P60953 AL139094.1-201ENST00000405549 1188 ntBASIC13.45□□□□□ -0.26
CDC42P60953 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.45□□□□□ -0.26
CDC42P60953 MEIS3P1-201ENST00000495167 958 ntBASIC13.45□□□□□ -0.26
CDC42P60953 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CDC42P60953 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
CDC42P60953 ZNF890P-202ENST00000530367 1156 ntBASIC13.45□□□□□ -0.26
CDC42P60953 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CDC42P60953 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC13.45□□□□□ -0.26
CDC42P60953 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
CDC42P60953 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC13.45□□□□□ -0.26
CDC42P60953 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.45□□□□□ -0.26
CDC42P60953 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC13.45□□□□□ -0.26
CDC42P60953 AL603764.1-201ENST00000636452 321 ntBASIC13.45□□□□□ -0.26
CDC42P60953 PRSS30P-206ENST00000641773 873 ntBASIC13.45□□□□□ -0.26
CDC42P60953 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC42P60953 AGAP10P-201ENST00000454844 2418 ntBASIC13.45□□□□□ -0.26
CDC42P60953 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
CDC42P60953 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC42P60953 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC42P60953 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC42P60953 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC42P60953 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CDC42P60953 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC42P60953 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC42P60953 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.45□□□□□ -0.26
CDC42P60953 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.45□□□□□ -0.26
CDC42P60953 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CDC42P60953 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CDC42P60953 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC42P60953 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CDC42P60953 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDC42P60953 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CDC42P60953 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
CDC42P60953 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.45□□□□□ -0.26
CDC42P60953 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CDC42P60953 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CDC42P60953 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms