Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
BRCA2P51587 AL133467.4-201ENST00000602953 725 ntBASIC15.83■□□□□ 0.13
BRCA2P51587 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
BRCA2P51587 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
BRCA2P51587 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
BRCA2P51587 AC009093.10-201ENST00000641956 1442 ntBASIC15.83■□□□□ 0.12
BRCA2P51587 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.83■□□□□ 0.12
BRCA2P51587 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
BRCA2P51587 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
BRCA2P51587 AC139749.1-202ENST00000617529 3139 ntBASIC15.83■□□□□ 0.12
BRCA2P51587 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
BRCA2P51587 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
BRCA2P51587 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
BRCA2P51587 LINC00449-201ENST00000366259 872 ntTSL 2 BASIC15.83■□□□□ 0.12
BRCA2P51587 AC073210.1-201ENST00000414799 232 ntBASIC15.83■□□□□ 0.12
BRCA2P51587 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
BRCA2P51587 GALP-202ENST00000440823 889 ntTSL 5 BASIC15.83■□□□□ 0.12
BRCA2P51587 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.83■□□□□ 0.12
BRCA2P51587 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.83■□□□□ 0.12
BRCA2P51587 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
BRCA2P51587 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC15.83■□□□□ 0.12
BRCA2P51587 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
BRCA2P51587 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
BRCA2P51587 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
BRCA2P51587 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
BRCA2P51587 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
BRCA2P51587 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.83■□□□□ 0.12
BRCA2P51587 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC15.82■□□□□ 0.12
BRCA2P51587 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC15.82■□□□□ 0.12
BRCA2P51587 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC15.82■□□□□ 0.12
BRCA2P51587 CLPP-205ENST00000596605 646 ntTSL 2 BASIC15.82■□□□□ 0.12
BRCA2P51587 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC15.82■□□□□ 0.12
BRCA2P51587 AL359091.4-201ENST00000610052 409 ntBASIC15.82■□□□□ 0.12
BRCA2P51587 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
BRCA2P51587 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.82■□□□□ 0.12
BRCA2P51587 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRCA2P51587 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRCA2P51587 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRCA2P51587 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRCA2P51587 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
BRCA2P51587 CYP2T1P-202ENST00000641596 2535 ntBASIC15.82■□□□□ 0.12
BRCA2P51587 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.82■□□□□ 0.12
BRCA2P51587 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRCA2P51587 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
BRCA2P51587 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC15.82■□□□□ 0.12
BRCA2P51587 AC093300.1-201ENST00000510368 1201 ntBASIC15.82■□□□□ 0.12
BRCA2P51587 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRCA2P51587 AP000920.1-201ENST00000531824 344 ntBASIC15.82■□□□□ 0.12
BRCA2P51587 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRCA2P51587 LINC02352-201ENST00000557928 468 ntTSL 5 BASIC15.82■□□□□ 0.12
BRCA2P51587 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC15.82■□□□□ 0.12
BRCA2P51587 AC009093.2-201ENST00000563477 546 ntTSL 4 BASIC15.82■□□□□ 0.12
BRCA2P51587 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC15.82■□□□□ 0.12
BRCA2P51587 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC15.82■□□□□ 0.12
BRCA2P51587 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
BRCA2P51587 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.82■□□□□ 0.12
BRCA2P51587 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRCA2P51587 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
BRCA2P51587 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.82■□□□□ 0.12
BRCA2P51587 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.82■□□□□ 0.12
BRCA2P51587 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC15.82■□□□□ 0.12
BRCA2P51587 AC073869.1-201ENST00000415574 2762 ntBASIC15.82■□□□□ 0.12
BRCA2P51587 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
BRCA2P51587 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRCA2P51587 RPL18AP16-201ENST00000424057 531 ntBASIC15.82■□□□□ 0.12
BRCA2P51587 PEBP1P3-201ENST00000455475 548 ntBASIC15.82■□□□□ 0.12
BRCA2P51587 RN7SL33P-201ENST00000462543 342 ntBASIC15.82■□□□□ 0.12
BRCA2P51587 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
BRCA2P51587 TYMSP2-201ENST00000589501 424 ntBASIC15.82■□□□□ 0.12
BRCA2P51587 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC15.82■□□□□ 0.12
BRCA2P51587 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRCA2P51587 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
BRCA2P51587 AC007952.5-201ENST00000572818 1486 ntBASIC15.82■□□□□ 0.12
BRCA2P51587 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.82■□□□□ 0.12
BRCA2P51587 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BRCA2P51587 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
BRCA2P51587 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRCA2P51587 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRCA2P51587 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
BRCA2P51587 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC15.81■□□□□ 0.12
BRCA2P51587 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRCA2P51587 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
BRCA2P51587 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.81■□□□□ 0.12
BRCA2P51587 KCNC4-AS1-201ENST00000455967 748 ntTSL 2 BASIC15.81■□□□□ 0.12
BRCA2P51587 DPY19L2P4-201ENST00000479881 442 ntBASIC15.81■□□□□ 0.12
BRCA2P51587 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
BRCA2P51587 BATF-202ENST00000555504 361 ntTSL 2 BASIC15.81■□□□□ 0.12
BRCA2P51587 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC15.81■□□□□ 0.12
BRCA2P51587 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC15.81■□□□□ 0.12
BRCA2P51587 HPX-213ENST00000615166 826 ntTSL 5 BASIC15.81■□□□□ 0.12
BRCA2P51587 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
BRCA2P51587 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRCA2P51587 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
BRCA2P51587 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
BRCA2P51587 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC15.81■□□□□ 0.12
BRCA2P51587 AC144831.1-201ENST00000573312 2656 ntBASIC15.81■□□□□ 0.12
BRCA2P51587 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRCA2P51587 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRCA2P51587 HNRNPA1P21-201ENST00000424115 961 ntBASIC15.81■□□□□ 0.12
BRCA2P51587 KCNMA1-AS1-201ENST00000426234 863 ntTSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms