Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.04■□□□□ 0.16
CPT1AP50416 AC006486.2-201ENST00000624246 2199 ntBASIC16.04■□□□□ 0.16
CPT1AP50416 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPT1AP50416 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC16.04■□□□□ 0.16
CPT1AP50416 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CPT1AP50416 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.04■□□□□ 0.16
CPT1AP50416 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
CPT1AP50416 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CPT1AP50416 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPT1AP50416 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPT1AP50416 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPT1AP50416 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPT1AP50416 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPT1AP50416 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC16.04■□□□□ 0.16
CPT1AP50416 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CPT1AP50416 RN7SKP109-201ENST00000410592 316 ntBASIC16.04■□□□□ 0.16
CPT1AP50416 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC16.04■□□□□ 0.16
CPT1AP50416 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC16.04■□□□□ 0.16
CPT1AP50416 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC16.04■□□□□ 0.16
CPT1AP50416 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC16.04■□□□□ 0.16
CPT1AP50416 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC16.04■□□□□ 0.16
CPT1AP50416 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC16.04■□□□□ 0.16
CPT1AP50416 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC16.04■□□□□ 0.16
CPT1AP50416 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC16.04■□□□□ 0.16
CPT1AP50416 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC16.04■□□□□ 0.16
CPT1AP50416 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC16.04■□□□□ 0.16
CPT1AP50416 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC16.04■□□□□ 0.16
CPT1AP50416 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC16.04■□□□□ 0.16
CPT1AP50416 AC140113.1-201ENST00000603467 169 ntBASIC16.04■□□□□ 0.16
CPT1AP50416 AC009145.4-201ENST00000625119 1294 ntBASIC16.04■□□□□ 0.16
CPT1AP50416 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPT1AP50416 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPT1AP50416 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CPT1AP50416 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CPT1AP50416 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPT1AP50416 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPT1AP50416 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPT1AP50416 AGGF1P1-201ENST00000509500 2073 ntBASIC16.04■□□□□ 0.16
CPT1AP50416 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPT1AP50416 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPT1AP50416 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.04■□□□□ 0.16
CPT1AP50416 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.04■□□□□ 0.16
CPT1AP50416 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPT1AP50416 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
CPT1AP50416 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC16.03■□□□□ 0.16
CPT1AP50416 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPT1AP50416 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPT1AP50416 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPT1AP50416 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CPT1AP50416 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPT1AP50416 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CPT1AP50416 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPT1AP50416 NORAD-201ENST00000565493 5339 ntBASIC16.03■□□□□ 0.16
CPT1AP50416 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPT1AP50416 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CPT1AP50416 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CPT1AP50416 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPT1AP50416 AC008741.2-201ENST00000612792 3115 ntBASIC16.03■□□□□ 0.16
CPT1AP50416 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPT1AP50416 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CPT1AP50416 SAT1-201ENST00000379251 801 ntTSL 2 BASIC16.03■□□□□ 0.16
CPT1AP50416 SAT1-202ENST00000379253 909 ntTSL 2 BASIC16.03■□□□□ 0.16
CPT1AP50416 SAT1-203ENST00000379254 868 ntTSL 3 BASIC16.03■□□□□ 0.16
CPT1AP50416 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPT1AP50416 BAX-205ENST00000391871 687 ntTSL 5 BASIC16.03■□□□□ 0.16
CPT1AP50416 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CPT1AP50416 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CPT1AP50416 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPT1AP50416 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC16.03■□□□□ 0.16
CPT1AP50416 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC16.03■□□□□ 0.16
CPT1AP50416 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC16.03■□□□□ 0.16
CPT1AP50416 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC16.03■□□□□ 0.16
CPT1AP50416 CD164-210ENST00000512821 964 ntTSL 2 BASIC16.03■□□□□ 0.16
CPT1AP50416 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
CPT1AP50416 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC16.03■□□□□ 0.16
CPT1AP50416 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC16.03■□□□□ 0.16
CPT1AP50416 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC16.03■□□□□ 0.16
CPT1AP50416 AC005041.3-201ENST00000606287 649 ntBASIC16.03■□□□□ 0.16
CPT1AP50416 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPT1AP50416 AC138466.5-201ENST00000624002 808 ntBASIC16.03■□□□□ 0.16
CPT1AP50416 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPT1AP50416 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CPT1AP50416 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPT1AP50416 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPT1AP50416 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPT1AP50416 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.03■□□□□ 0.16
CPT1AP50416 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.03■□□□□ 0.16
CPT1AP50416 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPT1AP50416 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPT1AP50416 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CPT1AP50416 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC16.03■□□□□ 0.16
CPT1AP50416 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CPT1AP50416 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.03■□□□□ 0.16
CPT1AP50416 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CPT1AP50416 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC16.03■□□□□ 0.16
CPT1AP50416 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CPT1AP50416 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC16.02■□□□□ 0.16
CPT1AP50416 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CPT1AP50416 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CPT1AP50416 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms