Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 HIST2H2BC-201ENST00000498492 580 ntBASIC13.93□□□□□ -0.18
MMP11P24347 AC106794.1-201ENST00000506935 792 ntBASIC13.93□□□□□ -0.18
MMP11P24347 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC13.93□□□□□ -0.18
MMP11P24347 HNRNPA1P36-201ENST00000521313 955 ntBASIC13.93□□□□□ -0.18
MMP11P24347 ADM-202ENST00000524948 584 ntTSL 2 BASIC13.93□□□□□ -0.18
MMP11P24347 NEU3-202ENST00000526068 431 ntTSL 2 BASIC13.93□□□□□ -0.18
MMP11P24347 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MMP11P24347 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC13.93□□□□□ -0.18
MMP11P24347 AC100827.2-201ENST00000563214 1194 ntBASIC13.93□□□□□ -0.18
MMP11P24347 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.93□□□□□ -0.18
MMP11P24347 DUX4L46-201ENST00000566845 751 ntBASIC13.93□□□□□ -0.18
MMP11P24347 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
MMP11P24347 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
MMP11P24347 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC13.93□□□□□ -0.18
MMP11P24347 AC009955.4-201ENST00000597192 544 ntBASIC13.93□□□□□ -0.18
MMP11P24347 BNIP3P13-201ENST00000599968 566 ntBASIC13.93□□□□□ -0.18
MMP11P24347 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MMP11P24347 AL162426.1-201ENST00000624141 743 ntBASIC13.93□□□□□ -0.18
MMP11P24347 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
MMP11P24347 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MMP11P24347 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
MMP11P24347 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
MMP11P24347 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MMP11P24347 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MMP11P24347 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
MMP11P24347 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MMP11P24347 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
MMP11P24347 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MMP11P24347 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MMP11P24347 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MMP11P24347 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MMP11P24347 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MMP11P24347 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
MMP11P24347 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
MMP11P24347 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
MMP11P24347 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
MMP11P24347 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MMP11P24347 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MMP11P24347 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MMP11P24347 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MMP11P24347 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MMP11P24347 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
MMP11P24347 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MMP11P24347 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
MMP11P24347 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MMP11P24347 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
MMP11P24347 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MMP11P24347 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MMP11P24347 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.92□□□□□ -0.18
MMP11P24347 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
MMP11P24347 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.92□□□□□ -0.18
MMP11P24347 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.92□□□□□ -0.18
MMP11P24347 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MMP11P24347 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MMP11P24347 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MMP11P24347 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.92□□□□□ -0.18
MMP11P24347 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MMP11P24347 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
MMP11P24347 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.92□□□□□ -0.18
MMP11P24347 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.92□□□□□ -0.18
MMP11P24347 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MMP11P24347 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC13.92□□□□□ -0.18
MMP11P24347 IGHJ2P-201ENST00000454480 60 ntBASIC13.92□□□□□ -0.18
MMP11P24347 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC13.92□□□□□ -0.18
MMP11P24347 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MMP11P24347 ALG3P1-201ENST00000508806 1114 ntBASIC13.92□□□□□ -0.18
MMP11P24347 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC13.92□□□□□ -0.18
MMP11P24347 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC13.92□□□□□ -0.18
MMP11P24347 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC13.92□□□□□ -0.18
MMP11P24347 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.92□□□□□ -0.18
MMP11P24347 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MMP11P24347 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.92□□□□□ -0.18
MMP11P24347 RN7SL163P-201ENST00000583100 276 ntBASIC13.92□□□□□ -0.18
MMP11P24347 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
MMP11P24347 AC023090.2-201ENST00000625182 2110 ntBASIC13.92□□□□□ -0.18
MMP11P24347 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MMP11P24347 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MMP11P24347 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
MMP11P24347 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.92□□□□□ -0.18
MMP11P24347 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MMP11P24347 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MMP11P24347 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MMP11P24347 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
MMP11P24347 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MMP11P24347 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.92□□□□□ -0.18
MMP11P24347 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.92□□□□□ -0.18
MMP11P24347 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MMP11P24347 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MMP11P24347 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MMP11P24347 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
MMP11P24347 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MMP11P24347 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.92□□□□□ -0.18
MMP11P24347 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.92□□□□□ -0.18
MMP11P24347 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MMP11P24347 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.91□□□□□ -0.18
MMP11P24347 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MMP11P24347 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
MMP11P24347 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
MMP11P24347 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MMP11P24347 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms