Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 MAPK10-262ENST00000641051 5738 ntBASIC12.48□□□□□ -0.41
VAMP1P23763 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
VAMP1P23763 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VAMP1P23763 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
VAMP1P23763 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VAMP1P23763 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
VAMP1P23763 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
VAMP1P23763 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VAMP1P23763 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VAMP1P23763 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC12.48□□□□□ -0.41
VAMP1P23763 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC12.48□□□□□ -0.41
VAMP1P23763 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC12.48□□□□□ -0.41
VAMP1P23763 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC12.48□□□□□ -0.41
VAMP1P23763 AC008686.1-201ENST00000586894 565 ntTSL 5 BASIC12.48□□□□□ -0.41
VAMP1P23763 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC12.48□□□□□ -0.41
VAMP1P23763 AP001542.1-201ENST00000591314 200 ntBASIC12.48□□□□□ -0.41
VAMP1P23763 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VAMP1P23763 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VAMP1P23763 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VAMP1P23763 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC12.48□□□□□ -0.41
VAMP1P23763 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.48□□□□□ -0.41
VAMP1P23763 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VAMP1P23763 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VAMP1P23763 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VAMP1P23763 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.48□□□□□ -0.41
VAMP1P23763 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC12.48□□□□□ -0.41
VAMP1P23763 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
VAMP1P23763 AC068760.1-201ENST00000493579 1953 ntBASIC12.48□□□□□ -0.41
VAMP1P23763 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
VAMP1P23763 AL137783.1-201ENST00000623494 1896 ntBASIC12.48□□□□□ -0.41
VAMP1P23763 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VAMP1P23763 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VAMP1P23763 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VAMP1P23763 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
VAMP1P23763 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VAMP1P23763 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC12.48□□□□□ -0.41
VAMP1P23763 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VAMP1P23763 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP1P23763 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.47□□□□□ -0.41
VAMP1P23763 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP1P23763 CYP27C1-202ENST00000409327 2092 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
VAMP1P23763 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP1P23763 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP1P23763 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP1P23763 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP1P23763 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP1P23763 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP1P23763 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP1P23763 GRIPAP1-201ENST00000376423 3031 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP1P23763 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
VAMP1P23763 KRT8P12-202ENST00000472924 1397 ntBASIC12.47□□□□□ -0.41
VAMP1P23763 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP1P23763 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC12.47□□□□□ -0.41
VAMP1P23763 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.47□□□□□ -0.41
VAMP1P23763 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP1P23763 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
VAMP1P23763 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC12.47□□□□□ -0.41
VAMP1P23763 AC015922.1-201ENST00000421102 1152 ntBASIC12.47□□□□□ -0.41
VAMP1P23763 FAM58CP-201ENST00000435741 640 ntBASIC12.47□□□□□ -0.41
VAMP1P23763 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.47□□□□□ -0.41
VAMP1P23763 TIMM8BP1-201ENST00000452384 211 ntBASIC12.47□□□□□ -0.41
VAMP1P23763 KRT8P48-201ENST00000515599 1220 ntBASIC12.47□□□□□ -0.41
VAMP1P23763 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC12.47□□□□□ -0.41
VAMP1P23763 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.47□□□□□ -0.41
VAMP1P23763 BANF1P1-201ENST00000553684 263 ntBASIC12.47□□□□□ -0.41
VAMP1P23763 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP1P23763 ARL16-209ENST00000573715 763 ntTSL 3 BASIC12.47□□□□□ -0.41
VAMP1P23763 ARL16-211ENST00000576135 694 ntTSL 3 BASIC12.47□□□□□ -0.41
VAMP1P23763 NT5C-211ENST00000582170 653 ntTSL 3 BASIC12.47□□□□□ -0.41
VAMP1P23763 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.47□□□□□ -0.41
VAMP1P23763 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.47□□□□□ -0.41
VAMP1P23763 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP1P23763 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC12.47□□□□□ -0.41
VAMP1P23763 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
VAMP1P23763 AL121895.1-202ENST00000441208 2701 ntTSL 2 BASIC12.47□□□□□ -0.41
VAMP1P23763 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC12.47□□□□□ -0.41
VAMP1P23763 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP1P23763 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
VAMP1P23763 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP1P23763 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.47□□□□□ -0.41
VAMP1P23763 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP1P23763 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP1P23763 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP1P23763 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.47□□□□□ -0.41
VAMP1P23763 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP1P23763 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
VAMP1P23763 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP1P23763 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP1P23763 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP1P23763 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.47□□□□□ -0.41
VAMP1P23763 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.47□□□□□ -0.41
VAMP1P23763 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP1P23763 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
VAMP1P23763 PCDHB18P-202ENST00000526308 3197 ntBASIC12.46□□□□□ -0.41
VAMP1P23763 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
VAMP1P23763 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VAMP1P23763 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC12.46□□□□□ -0.41
VAMP1P23763 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC12.46□□□□□ -0.41
VAMP1P23763 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
VAMP1P23763 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms