Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.16□□□□□ -0.3
HLA-DOBP13765 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DOBP13765 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DOBP13765 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DOBP13765 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.16□□□□□ -0.3
HLA-DOBP13765 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DOBP13765 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.16□□□□□ -0.3
HLA-DOBP13765 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DOBP13765 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DOBP13765 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DOBP13765 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DOBP13765 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
HLA-DOBP13765 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DOBP13765 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DOBP13765 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.16□□□□□ -0.3
HLA-DOBP13765 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
HLA-DOBP13765 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DOBP13765 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DOBP13765 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.16□□□□□ -0.3
HLA-DOBP13765 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.16□□□□□ -0.3
HLA-DOBP13765 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DOBP13765 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DOBP13765 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DOBP13765 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.16□□□□□ -0.3
HLA-DOBP13765 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.16□□□□□ -0.3
HLA-DOBP13765 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
HLA-DOBP13765 AP006547.1-201ENST00000563435 692 ntBASIC13.16□□□□□ -0.3
HLA-DOBP13765 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.16□□□□□ -0.3
HLA-DOBP13765 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.16□□□□□ -0.3
HLA-DOBP13765 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
HLA-DOBP13765 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.16□□□□□ -0.3
HLA-DOBP13765 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.16□□□□□ -0.3
HLA-DOBP13765 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.16□□□□□ -0.3
HLA-DOBP13765 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DOBP13765 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DOBP13765 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.16□□□□□ -0.3
HLA-DOBP13765 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.16□□□□□ -0.3
HLA-DOBP13765 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DOBP13765 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DOBP13765 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DOBP13765 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DOBP13765 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.16□□□□□ -0.3
HLA-DOBP13765 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.16□□□□□ -0.3
HLA-DOBP13765 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
HLA-DOBP13765 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DOBP13765 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
HLA-DOBP13765 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DOBP13765 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
HLA-DOBP13765 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.15□□□□□ -0.3
HLA-DOBP13765 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HLA-DOBP13765 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
HLA-DOBP13765 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
HLA-DOBP13765 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HLA-DOBP13765 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HLA-DOBP13765 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.15□□□□□ -0.3
HLA-DOBP13765 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.15□□□□□ -0.3
HLA-DOBP13765 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HLA-DOBP13765 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.15□□□□□ -0.3
HLA-DOBP13765 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HLA-DOBP13765 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HLA-DOBP13765 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.15□□□□□ -0.3
HLA-DOBP13765 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
HLA-DOBP13765 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.15□□□□□ -0.3
HLA-DOBP13765 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HLA-DOBP13765 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HLA-DOBP13765 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.15□□□□□ -0.3
HLA-DOBP13765 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HLA-DOBP13765 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HLA-DOBP13765 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.15□□□□□ -0.3
HLA-DOBP13765 AL136309.1-201ENST00000403917 691 ntBASIC13.15□□□□□ -0.3
HLA-DOBP13765 MIR1909-201ENST00000411312 80 ntBASIC13.15□□□□□ -0.3
HLA-DOBP13765 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.15□□□□□ -0.3
HLA-DOBP13765 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HLA-DOBP13765 CNN2P10-201ENST00000443067 918 ntBASIC13.15□□□□□ -0.3
HLA-DOBP13765 CHMP1AP1-201ENST00000445563 662 ntBASIC13.15□□□□□ -0.3
HLA-DOBP13765 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.15□□□□□ -0.3
HLA-DOBP13765 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
HLA-DOBP13765 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
HLA-DOBP13765 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.15□□□□□ -0.3
HLA-DOBP13765 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.15□□□□□ -0.3
HLA-DOBP13765 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.15□□□□□ -0.3
HLA-DOBP13765 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.15□□□□□ -0.3
HLA-DOBP13765 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.15□□□□□ -0.3
HLA-DOBP13765 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.15□□□□□ -0.3
HLA-DOBP13765 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.15□□□□□ -0.3
HLA-DOBP13765 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.15□□□□□ -0.3
HLA-DOBP13765 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.15□□□□□ -0.3
HLA-DOBP13765 MIR6775-201ENST00000617557 69 ntBASIC13.15□□□□□ -0.3
HLA-DOBP13765 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.15□□□□□ -0.3
HLA-DOBP13765 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.15□□□□□ -0.3
HLA-DOBP13765 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HLA-DOBP13765 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
HLA-DOBP13765 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
HLA-DOBP13765 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.15□□□□□ -0.3
HLA-DOBP13765 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HLA-DOBP13765 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HLA-DOBP13765 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HLA-DOBP13765 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.15□□□□□ -0.3
HLA-DOBP13765 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HLA-DOBP13765 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms