Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.24□□□□□ -0.13
TNFP01375 AL354702.1-201ENST00000442006 1960 ntBASIC14.24□□□□□ -0.13
TNFP01375 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TNFP01375 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TNFP01375 AC067750.1-201ENST00000608826 6545 ntBASIC14.24□□□□□ -0.13
TNFP01375 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC14.24□□□□□ -0.13
TNFP01375 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.24□□□□□ -0.13
TNFP01375 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TNFP01375 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TNFP01375 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TNFP01375 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC14.24□□□□□ -0.13
TNFP01375 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TNFP01375 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC14.24□□□□□ -0.13
TNFP01375 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TNFP01375 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC14.24□□□□□ -0.13
TNFP01375 CEP164P1-201ENST00000455142 418 ntBASIC14.24□□□□□ -0.13
TNFP01375 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC14.24□□□□□ -0.13
TNFP01375 RN7SL530P-201ENST00000485097 298 ntBASIC14.24□□□□□ -0.13
TNFP01375 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC14.24□□□□□ -0.13
TNFP01375 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
TNFP01375 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TNFP01375 PRKXP1-201ENST00000561423 1122 ntBASIC14.24□□□□□ -0.13
TNFP01375 AC005586.2-201ENST00000563946 837 ntBASIC14.24□□□□□ -0.13
TNFP01375 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TNFP01375 AC021016.3-201ENST00000608367 477 ntBASIC14.24□□□□□ -0.13
TNFP01375 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TNFP01375 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
TNFP01375 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
TNFP01375 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TNFP01375 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TNFP01375 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TNFP01375 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
TNFP01375 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TNFP01375 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TNFP01375 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.24□□□□□ -0.13
TNFP01375 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.24□□□□□ -0.13
TNFP01375 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TNFP01375 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TNFP01375 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TNFP01375 OR2I1P-210ENST00000642037 4691 ntBASIC14.24□□□□□ -0.13
TNFP01375 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TNFP01375 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
TNFP01375 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TNFP01375 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.24□□□□□ -0.13
TNFP01375 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.24□□□□□ -0.13
TNFP01375 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TNFP01375 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TNFP01375 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.23□□□□□ -0.13
TNFP01375 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TNFP01375 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TNFP01375 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TNFP01375 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TNFP01375 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TNFP01375 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TNFP01375 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TNFP01375 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TNFP01375 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
TNFP01375 KRT18P9-201ENST00000604826 1300 ntBASIC14.23□□□□□ -0.13
TNFP01375 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TNFP01375 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TNFP01375 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TNFP01375 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TNFP01375 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TNFP01375 RNA5SP359-201ENST00000364838 113 ntBASIC14.23□□□□□ -0.13
TNFP01375 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC14.23□□□□□ -0.13
TNFP01375 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC14.23□□□□□ -0.13
TNFP01375 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TNFP01375 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC14.23□□□□□ -0.13
TNFP01375 AL627231.1-201ENST00000394467 1125 ntBASIC14.23□□□□□ -0.13
TNFP01375 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TNFP01375 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC14.23□□□□□ -0.13
TNFP01375 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TNFP01375 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.23□□□□□ -0.13
TNFP01375 TMEM198B-204ENST00000484016 896 ntBASIC14.23□□□□□ -0.13
TNFP01375 RHEB-207ENST00000496004 744 ntTSL 2 BASIC14.23□□□□□ -0.13
TNFP01375 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TNFP01375 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TNFP01375 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC14.23□□□□□ -0.13
TNFP01375 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC14.23□□□□□ -0.13
TNFP01375 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.23□□□□□ -0.13
TNFP01375 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
TNFP01375 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC14.23□□□□□ -0.13
TNFP01375 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC14.23□□□□□ -0.13
TNFP01375 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
TNFP01375 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC14.23□□□□□ -0.13
TNFP01375 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TNFP01375 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC14.23□□□□□ -0.13
TNFP01375 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC14.23□□□□□ -0.13
TNFP01375 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TNFP01375 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.23□□□□□ -0.13
TNFP01375 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TNFP01375 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TNFP01375 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TNFP01375 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.23□□□□□ -0.13
TNFP01375 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TNFP01375 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TNFP01375 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.23□□□□□ -0.13
TNFP01375 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.23□□□□□ -0.13
TNFP01375 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.23□□□□□ -0.13
TNFP01375 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms