Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
CUX2O14529 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC24.24■■□□□ 1.47
CUX2O14529 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CUX2O14529 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CUX2O14529 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC24.24■■□□□ 1.47
CUX2O14529 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
CUX2O14529 AC069061.4-201ENST00000581294 1347 ntBASIC24.24■■□□□ 1.47
CUX2O14529 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CUX2O14529 CIDEC-204ENST00000430427 877 ntTSL 3 BASIC24.24■■□□□ 1.47
CUX2O14529 RN7SL794P-201ENST00000469816 280 ntBASIC24.24■■□□□ 1.47
CUX2O14529 AC093700.1-201ENST00000503348 717 ntBASIC24.24■■□□□ 1.47
CUX2O14529 RNA5SP288-201ENST00000516075 93 ntBASIC24.24■■□□□ 1.47
CUX2O14529 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC24.24■■□□□ 1.47
CUX2O14529 AC092296.1-201ENST00000587018 566 ntTSL 4 BASIC24.24■■□□□ 1.47
CUX2O14529 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CUX2O14529 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC24.24■■□□□ 1.47
CUX2O14529 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC24.24■■□□□ 1.47
CUX2O14529 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC24.23■■□□□ 1.47
CUX2O14529 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CUX2O14529 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CUX2O14529 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CUX2O14529 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
CUX2O14529 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CUX2O14529 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CUX2O14529 SFTPA2-202ENST00000372327 815 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CUX2O14529 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CUX2O14529 AL590399.1-204ENST00000430302 781 ntTSL 5 BASIC24.23■■□□□ 1.47
CUX2O14529 RN7SL351P-201ENST00000469306 248 ntBASIC24.23■■□□□ 1.47
CUX2O14529 AL358215.1-201ENST00000481350 482 ntTSL 5 BASIC24.23■■□□□ 1.47
CUX2O14529 RPL29P2-201ENST00000488409 460 ntBASIC24.23■■□□□ 1.47
CUX2O14529 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CUX2O14529 RPL30-213ENST00000523172 274 ntTSL 5 BASIC24.23■■□□□ 1.47
CUX2O14529 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC24.23■■□□□ 1.47
CUX2O14529 MIR6165-201ENST00000614803 84 ntBASIC24.23■■□□□ 1.47
CUX2O14529 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC24.23■■□□□ 1.47
CUX2O14529 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC24.23■■□□□ 1.47
CUX2O14529 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC24.23■■□□□ 1.47
CUX2O14529 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC24.23■■□□□ 1.47
CUX2O14529 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC24.23■■□□□ 1.47
CUX2O14529 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CUX2O14529 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CUX2O14529 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
CUX2O14529 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CUX2O14529 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CUX2O14529 AC092135.3-201ENST00000624151 1846 ntBASIC24.22■■□□□ 1.47
CUX2O14529 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CUX2O14529 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CUX2O14529 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC24.22■■□□□ 1.47
CUX2O14529 AC000078.1-201ENST00000420617 682 ntBASIC24.22■■□□□ 1.47
CUX2O14529 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC24.22■■□□□ 1.47
CUX2O14529 AC010894.2-201ENST00000444196 561 ntTSL 3 BASIC24.22■■□□□ 1.47
CUX2O14529 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CUX2O14529 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC24.22■■□□□ 1.47
CUX2O14529 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC24.22■■□□□ 1.47
CUX2O14529 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CUX2O14529 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CUX2O14529 BX510359.7-201ENST00000619819 630 ntBASIC24.22■■□□□ 1.47
CUX2O14529 AC022167.5-201ENST00000636296 1250 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
CUX2O14529 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CUX2O14529 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC24.22■■□□□ 1.47
CUX2O14529 AC067931.2-201ENST00000623655 2003 ntBASIC24.22■■□□□ 1.47
CUX2O14529 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CUX2O14529 PCDHGB8P-201ENST00000502926 1973 ntBASIC24.22■■□□□ 1.47
CUX2O14529 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CUX2O14529 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
CUX2O14529 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CUX2O14529 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CUX2O14529 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
CUX2O14529 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CUX2O14529 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CUX2O14529 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC24.21■■□□□ 1.47
CUX2O14529 UGT1A12P-201ENST00000447084 853 ntBASIC24.21■■□□□ 1.47
CUX2O14529 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC24.21■■□□□ 1.47
CUX2O14529 JPT1-205ENST00000470924 663 ntTSL 5 BASIC24.21■■□□□ 1.47
CUX2O14529 AC093300.1-201ENST00000510368 1201 ntBASIC24.21■■□□□ 1.47
CUX2O14529 AC025419.1-201ENST00000537250 690 ntTSL 3 BASIC24.21■■□□□ 1.47
CUX2O14529 MAFG-AS1-202ENST00000583492 969 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CUX2O14529 HPX-213ENST00000615166 826 ntTSL 5 BASIC24.21■■□□□ 1.47
CUX2O14529 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CUX2O14529 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CUX2O14529 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC24.21■■□□□ 1.47
CUX2O14529 MMP19-202ENST00000409200 1431 ntTSL 2 BASIC24.21■■□□□ 1.47
CUX2O14529 SERPINE3-203ENST00000521255 1439 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CUX2O14529 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
CUX2O14529 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CUX2O14529 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CUX2O14529 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CUX2O14529 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CUX2O14529 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
CUX2O14529 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
CUX2O14529 POP5-201ENST00000341039 913 ntTSL 2 BASIC24.2■■□□□ 1.47
CUX2O14529 ZNF32-AS2-201ENST00000418966 905 ntTSL 5 BASIC24.2■■□□□ 1.47
CUX2O14529 C3orf84-201ENST00000432035 669 ntAPPRIS ALT1 TSL 5 BASIC24.2■■□□□ 1.47
CUX2O14529 AL450346.2-201ENST00000495602 1024 ntBASIC24.2■■□□□ 1.47
CUX2O14529 AC091691.1-201ENST00000583587 1018 ntBASIC24.2■■□□□ 1.47
CUX2O14529 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC24.2■■□□□ 1.47
CUX2O14529 AC090386.2-201ENST00000623010 1039 ntBASIC24.2■■□□□ 1.47
CUX2O14529 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
CUX2O14529 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
CUX2O14529 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms