Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC128688.1-201ENST00000487626 519 ntBASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 RN7SL471P-201ENST00000580476 299 ntBASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 HNRNPMP1-201ENST00000560685 1768 ntBASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 AC091078.1-202ENST00000543286 2012 ntTSL 2 BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 TULP4-201ENST00000367094 5170 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 ADAM8-202ENST00000445355 3279 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 AIF1L-201ENST00000247291 3364 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 AL713866.1-201ENST00000563320 3125 ntBASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 NMT1-213ENST00000592782 4999 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 CCNG1-201ENST00000340828 2458 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 ARHGEF10-203ENST00000398560 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 GTF3C1-202ENST00000561623 7015 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 AMPD2-203ENST00000358729 2838 ntTSL 2 BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 SLC25A25-205ENST00000432073 3678 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 PRPF40B-202ENST00000380281 3154 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 POTEI-203ENST00000631234 2072 ntTSL 2 BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 LIN28A-202ENST00000326279 4008 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 CTCFL-217ENST00000608425 2915 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
CHKB-CPT1BH3BT56 B4GALT1-201ENST00000379731 4201 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 DAB1-206ENST00000414851 5168 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 CRHR2-201ENST00000341843 3131 ntTSL 5 BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 SHC1-210ENST00000448116 3481 ntAPPRIS ALT1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 GIGYF2-202ENST00000409196 5747 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 INAVA-201ENST00000367342 4298 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 LRRC37A3-211ENST00000584306 5665 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 ADPRH-201ENST00000357003 3439 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 AL357054.4-201ENST00000606285 2814 ntBASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 DRAM1-201ENST00000258534 3519 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 SNX1-201ENST00000261889 3373 ntTSL 2 BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 KLHL12-203ENST00000367261 3359 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 RBM4-205ENST00000409406 2321 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 ACOT11-202ENST00000371316 6369 ntAPPRIS P4 TSL 1 (best) BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 CROCCP5-201ENST00000436658 830 ntBASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 CDCA4P2-201ENST00000441182 718 ntBASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 GPX4-207ENST00000589115 812 ntTSL 2 BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 AKAP9-216ENST00000619023 6006 ntTSL 5 BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 LCORL-207ENST00000635767 10430 ntTSL 5 BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 GRK7-201ENST00000264952 3239 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC8.05□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms