Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC17.42■□□□□ 0.38
CLIP2Q9UDT6 AC020914.3-201ENST00000594712 304 ntBASIC17.42■□□□□ 0.38
CLIP2Q9UDT6 AC009955.4-201ENST00000597192 544 ntBASIC17.42■□□□□ 0.38
CLIP2Q9UDT6 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLIP2Q9UDT6 AC022748.3-201ENST00000621828 275 ntBASIC17.42■□□□□ 0.38
CLIP2Q9UDT6 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CLIP2Q9UDT6 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLIP2Q9UDT6 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLIP2Q9UDT6 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC17.42■□□□□ 0.38
CLIP2Q9UDT6 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLIP2Q9UDT6 API5-203ENST00000455725 2257 ntTSL 2 BASIC17.42■□□□□ 0.38
CLIP2Q9UDT6 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLIP2Q9UDT6 AC138028.6-201ENST00000616106 1482 ntBASIC17.42■□□□□ 0.38
CLIP2Q9UDT6 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC17.42■□□□□ 0.38
CLIP2Q9UDT6 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLIP2Q9UDT6 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC17.42■□□□□ 0.38
CLIP2Q9UDT6 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLIP2Q9UDT6 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLIP2Q9UDT6 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC17.42■□□□□ 0.38
CLIP2Q9UDT6 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLIP2Q9UDT6 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CLIP2Q9UDT6 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CLIP2Q9UDT6 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CLIP2Q9UDT6 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLIP2Q9UDT6 BX640514.1-201ENST00000583223 1918 ntBASIC17.41■□□□□ 0.38
CLIP2Q9UDT6 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CLIP2Q9UDT6 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLIP2Q9UDT6 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLIP2Q9UDT6 AC015656.1-201ENST00000624209 3578 ntBASIC17.41■□□□□ 0.38
CLIP2Q9UDT6 SF1-209ENST00000433274 2317 ntTSL 2 BASIC17.41■□□□□ 0.38
CLIP2Q9UDT6 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CLIP2Q9UDT6 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC17.41■□□□□ 0.38
CLIP2Q9UDT6 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC17.41■□□□□ 0.38
CLIP2Q9UDT6 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLIP2Q9UDT6 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.41■□□□□ 0.38
CLIP2Q9UDT6 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC17.41■□□□□ 0.38
CLIP2Q9UDT6 CSH2-202ENST00000345366 598 ntTSL 5 BASIC17.41■□□□□ 0.38
CLIP2Q9UDT6 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLIP2Q9UDT6 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLIP2Q9UDT6 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC17.41■□□□□ 0.38
CLIP2Q9UDT6 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.41■□□□□ 0.38
CLIP2Q9UDT6 BX284668.4-201ENST00000453917 508 ntBASIC17.41■□□□□ 0.38
CLIP2Q9UDT6 SCARNA20.5-201ENST00000516991 142 ntBASIC17.41■□□□□ 0.38
CLIP2Q9UDT6 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC17.41■□□□□ 0.38
CLIP2Q9UDT6 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC17.41■□□□□ 0.38
CLIP2Q9UDT6 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLIP2Q9UDT6 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC17.41■□□□□ 0.38
CLIP2Q9UDT6 AL023803.2-201ENST00000620080 638 ntBASIC17.41■□□□□ 0.38
CLIP2Q9UDT6 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC17.41■□□□□ 0.38
CLIP2Q9UDT6 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CLIP2Q9UDT6 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLIP2Q9UDT6 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC17.41■□□□□ 0.38
CLIP2Q9UDT6 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLIP2Q9UDT6 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLIP2Q9UDT6 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CLIP2Q9UDT6 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLIP2Q9UDT6 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLIP2Q9UDT6 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLIP2Q9UDT6 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLIP2Q9UDT6 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLIP2Q9UDT6 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC17.41■□□□□ 0.38
CLIP2Q9UDT6 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLIP2Q9UDT6 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
CLIP2Q9UDT6 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CLIP2Q9UDT6 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CLIP2Q9UDT6 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLIP2Q9UDT6 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC17.4■□□□□ 0.38
CLIP2Q9UDT6 KCP-203ENST00000610776 5108 ntTSL 5 BASIC17.4■□□□□ 0.38
CLIP2Q9UDT6 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CLIP2Q9UDT6 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC17.4■□□□□ 0.38
CLIP2Q9UDT6 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLIP2Q9UDT6 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLIP2Q9UDT6 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLIP2Q9UDT6 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLIP2Q9UDT6 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CLIP2Q9UDT6 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLIP2Q9UDT6 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC17.4■□□□□ 0.38
CLIP2Q9UDT6 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC17.4■□□□□ 0.38
CLIP2Q9UDT6 HIST2H2BC-201ENST00000498492 580 ntBASIC17.4■□□□□ 0.38
CLIP2Q9UDT6 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLIP2Q9UDT6 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC17.4■□□□□ 0.38
CLIP2Q9UDT6 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC17.4■□□□□ 0.38
CLIP2Q9UDT6 ACTG1P17-201ENST00000558391 1119 ntBASIC17.4■□□□□ 0.38
CLIP2Q9UDT6 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLIP2Q9UDT6 IGHV3OR16-16-201ENST00000563644 343 ntBASIC17.4■□□□□ 0.38
CLIP2Q9UDT6 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CLIP2Q9UDT6 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC17.4■□□□□ 0.38
CLIP2Q9UDT6 BX088702.1-201ENST00000610784 235 ntBASIC17.4■□□□□ 0.38
CLIP2Q9UDT6 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLIP2Q9UDT6 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC17.4■□□□□ 0.38
CLIP2Q9UDT6 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CLIP2Q9UDT6 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLIP2Q9UDT6 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLIP2Q9UDT6 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC17.4■□□□□ 0.38
CLIP2Q9UDT6 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLIP2Q9UDT6 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLIP2Q9UDT6 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLIP2Q9UDT6 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLIP2Q9UDT6 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CLIP2Q9UDT6 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms