Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC12.87□□□□□ -0.35
TMEM54Q969K7 RPL35-206ENST00000629845 340 ntTSL 5 BASIC12.87□□□□□ -0.35
TMEM54Q969K7 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
TMEM54Q969K7 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TMEM54Q969K7 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TMEM54Q969K7 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
TMEM54Q969K7 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
TMEM54Q969K7 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
TMEM54Q969K7 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TMEM54Q969K7 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC12.87□□□□□ -0.35
TMEM54Q969K7 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TMEM54Q969K7 AC097376.2-205ENST00000610159 5334 ntBASIC12.87□□□□□ -0.35
TMEM54Q969K7 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TMEM54Q969K7 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TMEM54Q969K7 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TMEM54Q969K7 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TMEM54Q969K7 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TMEM54Q969K7 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TMEM54Q969K7 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TMEM54Q969K7 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC12.87□□□□□ -0.35
TMEM54Q969K7 TUBB8P4-201ENST00000511806 1324 ntBASIC12.87□□□□□ -0.35
TMEM54Q969K7 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM54Q969K7 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.86□□□□□ -0.35
TMEM54Q969K7 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM54Q969K7 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.86□□□□□ -0.35
TMEM54Q969K7 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM54Q969K7 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM54Q969K7 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
TMEM54Q969K7 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM54Q969K7 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.86□□□□□ -0.35
TMEM54Q969K7 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM54Q969K7 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM54Q969K7 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
TMEM54Q969K7 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM54Q969K7 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC12.86□□□□□ -0.35
TMEM54Q969K7 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM54Q969K7 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.86□□□□□ -0.35
TMEM54Q969K7 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM54Q969K7 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM54Q969K7 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.86□□□□□ -0.35
TMEM54Q969K7 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM54Q969K7 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM54Q969K7 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM54Q969K7 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC12.86□□□□□ -0.35
TMEM54Q969K7 GOLGA2P4-201ENST00000441462 777 ntBASIC12.86□□□□□ -0.35
TMEM54Q969K7 ST13P19-201ENST00000442505 1124 ntBASIC12.86□□□□□ -0.35
TMEM54Q969K7 RPL13AP20-201ENST00000459725 609 ntBASIC12.86□□□□□ -0.35
TMEM54Q969K7 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM54Q969K7 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC12.86□□□□□ -0.35
TMEM54Q969K7 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
TMEM54Q969K7 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM54Q969K7 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM54Q969K7 FAM86HP-204ENST00000513466 959 ntBASIC12.86□□□□□ -0.35
TMEM54Q969K7 USB1-203ENST00000539737 1212 ntTSL 2 BASIC12.86□□□□□ -0.35
TMEM54Q969K7 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM54Q969K7 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM54Q969K7 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM54Q969K7 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC12.86□□□□□ -0.35
TMEM54Q969K7 AC005962.1-201ENST00000584100 773 ntBASIC12.86□□□□□ -0.35
TMEM54Q969K7 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC12.86□□□□□ -0.35
TMEM54Q969K7 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
TMEM54Q969K7 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC12.86□□□□□ -0.35
TMEM54Q969K7 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC12.86□□□□□ -0.35
TMEM54Q969K7 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC12.86□□□□□ -0.35
TMEM54Q969K7 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM54Q969K7 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM54Q969K7 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC12.86□□□□□ -0.35
TMEM54Q969K7 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC12.86□□□□□ -0.35
TMEM54Q969K7 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC12.86□□□□□ -0.35
TMEM54Q969K7 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC12.86□□□□□ -0.35
TMEM54Q969K7 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
TMEM54Q969K7 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM54Q969K7 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM54Q969K7 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM54Q969K7 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
TMEM54Q969K7 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
TMEM54Q969K7 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM54Q969K7 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
TMEM54Q969K7 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
TMEM54Q969K7 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM54Q969K7 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
TMEM54Q969K7 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC12.85□□□□□ -0.35
TMEM54Q969K7 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC12.85□□□□□ -0.35
TMEM54Q969K7 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.85□□□□□ -0.35
TMEM54Q969K7 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC12.85□□□□□ -0.35
TMEM54Q969K7 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TMEM54Q969K7 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
TMEM54Q969K7 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TMEM54Q969K7 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
TMEM54Q969K7 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
TMEM54Q969K7 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TMEM54Q969K7 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TMEM54Q969K7 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC12.85□□□□□ -0.35
TMEM54Q969K7 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC12.85□□□□□ -0.35
TMEM54Q969K7 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC12.85□□□□□ -0.35
TMEM54Q969K7 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
TMEM54Q969K7 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
TMEM54Q969K7 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
TMEM54Q969K7 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
TMEM54Q969K7 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms