Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLHC1Q8NHS4 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLHC1Q8NHS4 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLHC1Q8NHS4 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLHC1Q8NHS4 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.16□□□□□ -0.14
CLHC1Q8NHS4 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLHC1Q8NHS4 AL137784.3-201ENST00000623858 2288 ntBASIC14.16□□□□□ -0.14
CLHC1Q8NHS4 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLHC1Q8NHS4 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLHC1Q8NHS4 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLHC1Q8NHS4 CLUHP2-201ENST00000426660 1303 ntBASIC14.15□□□□□ -0.14
CLHC1Q8NHS4 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLHC1Q8NHS4 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLHC1Q8NHS4 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLHC1Q8NHS4 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CLHC1Q8NHS4 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.15□□□□□ -0.14
CLHC1Q8NHS4 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLHC1Q8NHS4 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CLHC1Q8NHS4 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLHC1Q8NHS4 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.15□□□□□ -0.14
CLHC1Q8NHS4 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CLHC1Q8NHS4 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLHC1Q8NHS4 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.15□□□□□ -0.14
CLHC1Q8NHS4 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.15□□□□□ -0.14
CLHC1Q8NHS4 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLHC1Q8NHS4 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.15□□□□□ -0.14
CLHC1Q8NHS4 ACKR1-201ENST00000368121 1240 ntBASIC14.15□□□□□ -0.14
CLHC1Q8NHS4 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLHC1Q8NHS4 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.15□□□□□ -0.14
CLHC1Q8NHS4 FAM207CP-201ENST00000443486 507 ntBASIC14.15□□□□□ -0.14
CLHC1Q8NHS4 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.15□□□□□ -0.14
CLHC1Q8NHS4 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CLHC1Q8NHS4 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CLHC1Q8NHS4 AC190387.1-201ENST00000551683 408 ntBASIC14.15□□□□□ -0.14
CLHC1Q8NHS4 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CLHC1Q8NHS4 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CLHC1Q8NHS4 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLHC1Q8NHS4 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLHC1Q8NHS4 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLHC1Q8NHS4 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CLHC1Q8NHS4 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CLHC1Q8NHS4 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLHC1Q8NHS4 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.15□□□□□ -0.14
CLHC1Q8NHS4 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLHC1Q8NHS4 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.15□□□□□ -0.14
CLHC1Q8NHS4 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CLHC1Q8NHS4 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLHC1Q8NHS4 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLHC1Q8NHS4 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLHC1Q8NHS4 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.15□□□□□ -0.14
CLHC1Q8NHS4 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.15□□□□□ -0.14
CLHC1Q8NHS4 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.15□□□□□ -0.14
CLHC1Q8NHS4 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.15□□□□□ -0.14
CLHC1Q8NHS4 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLHC1Q8NHS4 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLHC1Q8NHS4 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLHC1Q8NHS4 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CLHC1Q8NHS4 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLHC1Q8NHS4 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLHC1Q8NHS4 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLHC1Q8NHS4 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14.14□□□□□ -0.15
CLHC1Q8NHS4 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLHC1Q8NHS4 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLHC1Q8NHS4 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLHC1Q8NHS4 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLHC1Q8NHS4 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLHC1Q8NHS4 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.14□□□□□ -0.15
CLHC1Q8NHS4 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLHC1Q8NHS4 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLHC1Q8NHS4 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLHC1Q8NHS4 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CLHC1Q8NHS4 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
CLHC1Q8NHS4 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.14□□□□□ -0.15
CLHC1Q8NHS4 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLHC1Q8NHS4 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CLHC1Q8NHS4 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.14□□□□□ -0.15
CLHC1Q8NHS4 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.14□□□□□ -0.15
CLHC1Q8NHS4 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.14□□□□□ -0.15
CLHC1Q8NHS4 AC145423.3-201ENST00000615987 467 ntBASIC14.14□□□□□ -0.15
CLHC1Q8NHS4 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.14□□□□□ -0.15
CLHC1Q8NHS4 AL033527.5-201ENST00000641382 801 ntBASIC14.14□□□□□ -0.15
CLHC1Q8NHS4 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLHC1Q8NHS4 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLHC1Q8NHS4 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLHC1Q8NHS4 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLHC1Q8NHS4 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC14.14□□□□□ -0.15
CLHC1Q8NHS4 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CLHC1Q8NHS4 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLHC1Q8NHS4 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLHC1Q8NHS4 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLHC1Q8NHS4 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.14□□□□□ -0.15
CLHC1Q8NHS4 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
CLHC1Q8NHS4 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
CLHC1Q8NHS4 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLHC1Q8NHS4 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLHC1Q8NHS4 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.14□□□□□ -0.15
CLHC1Q8NHS4 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLHC1Q8NHS4 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLHC1Q8NHS4 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLHC1Q8NHS4 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms