Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 PPY2P-201ENST00000582808 702 ntBASIC12.83□□□□□ -0.36
HIST1H3AP68431 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H3AP68431 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC12.83□□□□□ -0.36
HIST1H3AP68431 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC12.83□□□□□ -0.36
HIST1H3AP68431 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H3AP68431 PFAS-212ENST00000625942 396 ntTSL 5 BASIC12.83□□□□□ -0.36
HIST1H3AP68431 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC12.83□□□□□ -0.36
HIST1H3AP68431 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
HIST1H3AP68431 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H3AP68431 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.83□□□□□ -0.36
HIST1H3AP68431 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H3AP68431 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H3AP68431 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H3AP68431 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.83□□□□□ -0.36
HIST1H3AP68431 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
HIST1H3AP68431 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H3AP68431 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H3AP68431 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
HIST1H3AP68431 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H3AP68431 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H3AP68431 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H3AP68431 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
HIST1H3AP68431 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.83□□□□□ -0.36
HIST1H3AP68431 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H3AP68431 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC12.83□□□□□ -0.36
HIST1H3AP68431 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.83□□□□□ -0.36
HIST1H3AP68431 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC12.83□□□□□ -0.36
HIST1H3AP68431 PDIA3P1-201ENST00000471856 1510 ntBASIC12.83□□□□□ -0.36
HIST1H3AP68431 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.82□□□□□ -0.36
HIST1H3AP68431 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H3AP68431 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H3AP68431 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H3AP68431 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H3AP68431 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC12.82□□□□□ -0.36
HIST1H3AP68431 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H3AP68431 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
HIST1H3AP68431 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H3AP68431 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC12.82□□□□□ -0.36
HIST1H3AP68431 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H3AP68431 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.82□□□□□ -0.36
HIST1H3AP68431 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
HIST1H3AP68431 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC12.82□□□□□ -0.36
HIST1H3AP68431 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H3AP68431 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.82□□□□□ -0.36
HIST1H3AP68431 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
HIST1H3AP68431 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H3AP68431 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
HIST1H3AP68431 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H3AP68431 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H3AP68431 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
HIST1H3AP68431 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC12.82□□□□□ -0.36
HIST1H3AP68431 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC12.82□□□□□ -0.36
HIST1H3AP68431 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC12.82□□□□□ -0.36
HIST1H3AP68431 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H3AP68431 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC12.82□□□□□ -0.36
HIST1H3AP68431 HIST1H2BPS3-201ENST00000419683 341 ntBASIC12.82□□□□□ -0.36
HIST1H3AP68431 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC12.82□□□□□ -0.36
HIST1H3AP68431 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC12.82□□□□□ -0.36
HIST1H3AP68431 AL161932.2-201ENST00000435436 679 ntBASIC12.82□□□□□ -0.36
HIST1H3AP68431 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC12.82□□□□□ -0.36
HIST1H3AP68431 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC12.82□□□□□ -0.36
HIST1H3AP68431 GAPDHP21-201ENST00000450301 1010 ntBASIC12.82□□□□□ -0.36
HIST1H3AP68431 CROCCP4-201ENST00000457096 498 ntBASIC12.82□□□□□ -0.36
HIST1H3AP68431 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC12.82□□□□□ -0.36
HIST1H3AP68431 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
HIST1H3AP68431 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC12.82□□□□□ -0.36
HIST1H3AP68431 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
HIST1H3AP68431 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H3AP68431 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.82□□□□□ -0.36
HIST1H3AP68431 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H3AP68431 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC12.82□□□□□ -0.36
HIST1H3AP68431 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC12.82□□□□□ -0.36
HIST1H3AP68431 AC104506.1-201ENST00000609247 429 ntBASIC12.82□□□□□ -0.36
HIST1H3AP68431 AC012645.4-201ENST00000610691 1061 ntBASIC12.82□□□□□ -0.36
HIST1H3AP68431 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.82□□□□□ -0.36
HIST1H3AP68431 AL162274.1-201ENST00000617191 1098 ntBASIC12.82□□□□□ -0.36
HIST1H3AP68431 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.82□□□□□ -0.36
HIST1H3AP68431 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
HIST1H3AP68431 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H3AP68431 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H3AP68431 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H3AP68431 KRT8P4-201ENST00000509735 1454 ntBASIC12.82□□□□□ -0.36
HIST1H3AP68431 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC12.82□□□□□ -0.36
HIST1H3AP68431 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H3AP68431 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H3AP68431 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H3AP68431 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H3AP68431 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC12.82□□□□□ -0.36
HIST1H3AP68431 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H3AP68431 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H3AP68431 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H3AP68431 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H3AP68431 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.82□□□□□ -0.36
HIST1H3AP68431 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
HIST1H3AP68431 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H3AP68431 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H3AP68431 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H3AP68431 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H3AP68431 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.82□□□□□ -0.36
HIST1H3AP68431 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms