Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
EPHA3P29320 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
EPHA3P29320 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.33□□□□□ -0.12
EPHA3P29320 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
EPHA3P29320 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
EPHA3P29320 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
EPHA3P29320 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.33□□□□□ -0.12
EPHA3P29320 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.33□□□□□ -0.12
EPHA3P29320 KLF2P2-201ENST00000416807 1039 ntBASIC14.33□□□□□ -0.12
EPHA3P29320 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.33□□□□□ -0.12
EPHA3P29320 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.33□□□□□ -0.12
EPHA3P29320 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
EPHA3P29320 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.33□□□□□ -0.12
EPHA3P29320 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.33□□□□□ -0.12
EPHA3P29320 FAM86GP-201ENST00000448322 971 ntBASIC14.33□□□□□ -0.12
EPHA3P29320 AC114812.1-204ENST00000449669 728 ntBASIC14.33□□□□□ -0.12
EPHA3P29320 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.33□□□□□ -0.12
EPHA3P29320 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.33□□□□□ -0.12
EPHA3P29320 GIMAP3P-201ENST00000495150 836 ntBASIC14.33□□□□□ -0.12
EPHA3P29320 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.33□□□□□ -0.12
EPHA3P29320 TPRX2P-201ENST00000535362 881 ntBASIC14.33□□□□□ -0.12
EPHA3P29320 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.33□□□□□ -0.12
EPHA3P29320 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.33□□□□□ -0.12
EPHA3P29320 AC004466.1-201ENST00000599515 1080 ntBASIC14.33□□□□□ -0.12
EPHA3P29320 AL390955.2-201ENST00000603032 514 ntBASIC14.33□□□□□ -0.12
EPHA3P29320 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.33□□□□□ -0.12
EPHA3P29320 AC093028.1-201ENST00000622998 982 ntBASIC14.33□□□□□ -0.12
EPHA3P29320 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
EPHA3P29320 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.33□□□□□ -0.12
EPHA3P29320 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
EPHA3P29320 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.33□□□□□ -0.12
EPHA3P29320 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
EPHA3P29320 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
EPHA3P29320 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
EPHA3P29320 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.33□□□□□ -0.12
EPHA3P29320 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.33□□□□□ -0.12
EPHA3P29320 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
EPHA3P29320 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
EPHA3P29320 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
EPHA3P29320 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
EPHA3P29320 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.33□□□□□ -0.12
EPHA3P29320 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
EPHA3P29320 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
EPHA3P29320 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA3P29320 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA3P29320 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
EPHA3P29320 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA3P29320 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA3P29320 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA3P29320 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA3P29320 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
EPHA3P29320 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
EPHA3P29320 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA3P29320 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA3P29320 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA3P29320 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14.32□□□□□ -0.12
EPHA3P29320 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA3P29320 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA3P29320 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA3P29320 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
EPHA3P29320 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA3P29320 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
EPHA3P29320 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.32□□□□□ -0.12
EPHA3P29320 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.32□□□□□ -0.12
EPHA3P29320 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.32□□□□□ -0.12
EPHA3P29320 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.32□□□□□ -0.12
EPHA3P29320 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
EPHA3P29320 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.32□□□□□ -0.12
EPHA3P29320 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.32□□□□□ -0.12
EPHA3P29320 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
EPHA3P29320 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.32□□□□□ -0.12
EPHA3P29320 AL603764.1-201ENST00000636452 321 ntBASIC14.32□□□□□ -0.12
EPHA3P29320 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA3P29320 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA3P29320 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA3P29320 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA3P29320 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.32□□□□□ -0.12
EPHA3P29320 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
EPHA3P29320 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA3P29320 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA3P29320 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA3P29320 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC14.32□□□□□ -0.12
EPHA3P29320 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
EPHA3P29320 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA3P29320 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC14.32□□□□□ -0.12
EPHA3P29320 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.32□□□□□ -0.12
EPHA3P29320 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
EPHA3P29320 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC14.32□□□□□ -0.12
EPHA3P29320 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
EPHA3P29320 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA3P29320 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA3P29320 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA3P29320 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EPHA3P29320 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.31□□□□□ -0.12
EPHA3P29320 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
EPHA3P29320 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
EPHA3P29320 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
EPHA3P29320 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
EPHA3P29320 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
EPHA3P29320 AC083964.2-201ENST00000623988 2396 ntBASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms