Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
RAB3BP20337 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB3BP20337 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RAB3BP20337 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RAB3BP20337 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB3BP20337 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB3BP20337 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB3BP20337 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB3BP20337 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
RAB3BP20337 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB3BP20337 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB3BP20337 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB3BP20337 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB3BP20337 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
RAB3BP20337 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RAB3BP20337 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
RAB3BP20337 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB3BP20337 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB3BP20337 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.92□□□□□ -0.34
RAB3BP20337 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB3BP20337 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
RAB3BP20337 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.92□□□□□ -0.34
RAB3BP20337 AC004461.1-201ENST00000412461 403 ntBASIC12.92□□□□□ -0.34
RAB3BP20337 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
RAB3BP20337 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC12.92□□□□□ -0.34
RAB3BP20337 AC007969.1-201ENST00000433675 447 ntBASIC12.92□□□□□ -0.34
RAB3BP20337 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC12.92□□□□□ -0.34
RAB3BP20337 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RAB3BP20337 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.92□□□□□ -0.34
RAB3BP20337 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB3BP20337 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.92□□□□□ -0.34
RAB3BP20337 TIMM17BP1-201ENST00000545713 516 ntBASIC12.92□□□□□ -0.34
RAB3BP20337 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.92□□□□□ -0.34
RAB3BP20337 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC12.92□□□□□ -0.34
RAB3BP20337 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB3BP20337 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
RAB3BP20337 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.92□□□□□ -0.34
RAB3BP20337 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB3BP20337 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB3BP20337 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB3BP20337 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
RAB3BP20337 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RAB3BP20337 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RAB3BP20337 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.92□□□□□ -0.34
RAB3BP20337 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB3BP20337 AL138799.1-201ENST00000448213 1675 ntBASIC12.92□□□□□ -0.34
RAB3BP20337 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
RAB3BP20337 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
RAB3BP20337 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB3BP20337 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB3BP20337 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB3BP20337 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.92□□□□□ -0.34
RAB3BP20337 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.91□□□□□ -0.34
RAB3BP20337 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.91□□□□□ -0.34
RAB3BP20337 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB3BP20337 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.91□□□□□ -0.34
RAB3BP20337 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB3BP20337 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB3BP20337 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RAB3BP20337 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB3BP20337 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RAB3BP20337 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB3BP20337 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
RAB3BP20337 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RAB3BP20337 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RAB3BP20337 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RAB3BP20337 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.91□□□□□ -0.34
RAB3BP20337 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.91□□□□□ -0.34
RAB3BP20337 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB3BP20337 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB3BP20337 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB3BP20337 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB3BP20337 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB3BP20337 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
RAB3BP20337 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB3BP20337 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
RAB3BP20337 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
RAB3BP20337 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC12.91□□□□□ -0.34
RAB3BP20337 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB3BP20337 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB3BP20337 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.91□□□□□ -0.34
RAB3BP20337 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB3BP20337 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC12.91□□□□□ -0.34
RAB3BP20337 TLE1P1-201ENST00000422965 589 ntBASIC12.91□□□□□ -0.34
RAB3BP20337 NUS1P3-201ENST00000423502 862 ntBASIC12.91□□□□□ -0.34
RAB3BP20337 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.91□□□□□ -0.34
RAB3BP20337 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB3BP20337 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
RAB3BP20337 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB3BP20337 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RAB3BP20337 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC12.91□□□□□ -0.34
RAB3BP20337 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC12.91□□□□□ -0.34
RAB3BP20337 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC12.91□□□□□ -0.34
RAB3BP20337 DUX4L47-201ENST00000566374 394 ntBASIC12.91□□□□□ -0.34
RAB3BP20337 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC12.91□□□□□ -0.34
RAB3BP20337 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB3BP20337 BX640515.1-201ENST00000617215 977 ntBASIC12.91□□□□□ -0.34
RAB3BP20337 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RAB3BP20337 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RAB3BP20337 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms